Factsheet for GSMUA_Achr6P07610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 3
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	mitochondrion, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum	77.81	72.85
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	76.33	67.72
GSMUA_Achr9P21990_001	Banana	plasma membrane	74.56	66.67
TraesCS3D01G174800.1	Wheat	plasma membrane	73.96	64.27
TraesCS3B01G199200.1	Wheat	plasma membrane	74.26	64.19
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	73.67	64.01
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	72.49	63.8
HORVU3Hr1G033800.1	Barley	plastid	74.56	63.8
TraesCS3A01G167000.1	Wheat	plasma membrane	73.96	62.03
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	64.79	61.34
KRH51762	Soybean	mitochondrion	56.8	61.15
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	69.23	60.62
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.32	60.1
Os01t0247700-01	Rice	extracellular, plasma membrane	61.54	59.94
EER99979	Sorghum	plastid	73.96	59.52
KRH56158	Soybean	golgi, peroxisome, plasma membrane	64.5	58.92
KRH25357	Soybean	plasma membrane	51.78	58.53
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	53.85	58.15
KRH61084	Soybean	golgi, peroxisome, plasma membrane	66.27	57.88
CDY19522	Canola	endoplasmic reticulum	34.02	57.79
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	34.02	56.65
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	40.53	56.15
Os05t0269200-00	Rice	cytosol, golgi, plasma membrane	66.27	56.14
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	61.54	55.76
AT1G62280.1	Thale cress	plasma membrane	60.06	52.73
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	61.83	52.51
AT1G62262.1	Thale cress	plasma membrane	56.51	52.33
CDY12936	Canola	plasma membrane	58.88	52.23
Bra027058.1-P	Field mustard	plasma membrane	58.58	51.97
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	41.42	51.28
CDY08628	Canola	golgi, peroxisome, plasma membrane	57.69	50.39
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	57.69	50.39
CDY03280	Canola	plasma membrane	57.69	49.74
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	27.22	49.73
KRH51125	Soybean	plasma membrane	54.73	49.33
KRH02037	Soybean	plasma membrane	53.85	48.79
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.83	48.78
CDY24881	Canola	extracellular	26.63	46.88
HORVU2Hr1G118150.1	Barley	peroxisome	40.83	46.15
Bra034474.1-P	Field mustard	peroxisome	29.59	45.87
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	42.6	43.64
CDY19523	Canola	cytosol, extracellular, plasma membrane	13.61	36.22
CDY12934	Canola	cytosol, extracellular, plasma membrane	13.61	33.58
CDY08625	Canola	plasma membrane	19.23	32.34
GSMUA_Achr9P05400_001	Banana	plastid	36.09	27.35
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	30.47	25.62
GSMUA_Achr8P12070_001	Banana	cytosol	36.98	25.05
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plasma membrane	38.17	23.89
GSMUA_Achr5P20180_001	Banana	cytosol	38.76	23.06
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus, plastid	38.76	22.47
GSMUA_Achr7P14260_001	Banana	cytosol	36.98	20.97
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	36.98	20.9
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	30.47	20.24
GSMUA_Achr2P06370_001	Banana	nucleus	3.25	9.57
CDX97407	Canola	cytosol	0.3	0.68

Protein Annotations

EnsemblPlants:GSMUA_Achr6P07610_001	EnsemblPlants:GSMUA_Achr6T07610_001	EnsemblPlantsGene:GSMUA_Achr6G07610_001	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel
InterPro:Voltage-dep_anion_channel_sf	PANTHER:PTHR31269	PANTHER:PTHR31269:SF4	PFAM:PF03595	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296BBBD	UniProt:M0T510	MapMan:24.3.10	:	:	:

Description

Putative uncharacterized protein OSJNBa0004G10.36 [Source:GMGC_GENE;Acc:GSMUA_Achr6G07610_001]

Coordinates

chr6:+:5171582..5173089

Molecular Weight (calculated)

38136.5 Da

IEP (calculated)

10.033

GRAVY (calculated)

0.742

Length

338 amino acids

Sequence
(BLAST)

001: MLTRFHAGYF RISLSLCGQA LLWKTLIEPS TDARALRAVV SRLPSFAFVL FWSLAFLTLL ALCFLYVARC VLRFRSVRAE FAHHVGMNYL FAPWISWLLL
101: LQSAPFLRPN TNGYLLLWWL FSLPILALDV KIYGQWFTQG KKFLSTVANP TSQISVIGNL VGARAAAQMG WRESALCMFS LGIAHYLVLF VTLYQRLLGS
201: NSLPAMLRPV FFLFFAAPSM ASLAWDSISS TFDTPCKMLF FLSLFLFASL VCRPALFRRS MRRFSVAWWA YSFPLSVLAL AATEYAQEAK GAVANVLMLV
301: LSVLSVVVTL VLMVFTAIKT NDLLPHDDPF MCSFDNMQ

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.