Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH25357 | Soybean | plasma membrane | 72.43 | 89.63 |
GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 58.92 | 64.5 |
VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 64.59 | 61.92 |
CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.16 | 61.66 |
KRH51762 | Soybean | mitochondrion | 51.35 | 60.51 |
KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 61.35 | 58.66 |
CDY19522 | Canola | endoplasmic reticulum | 31.08 | 57.79 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum | 55.95 | 57.34 |
CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 31.08 | 56.65 |
GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 57.84 | 56.17 |
Bra036662.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 37.03 | 56.15 |
GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 58.11 | 55.99 |
AT1G62262.1 | Thale cress | plasma membrane | 54.32 | 55.07 |
Bra027058.1-P | Field mustard | plasma membrane | 56.22 | 54.59 |
CDY12936 | Canola | plasma membrane | 56.22 | 54.59 |
GSMUA_Achr9P21990_001 | Banana | plasma membrane | 55.14 | 53.97 |
KRH51125 | Soybean | plasma membrane | 53.78 | 53.07 |
AT1G62280.1 | Thale cress | plasma membrane | 54.86 | 52.73 |
CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 55.14 | 52.71 |
CDY08628 | Canola | golgi, peroxisome, plasma membrane | 54.32 | 51.94 |
KRH02037 | Soybean | plasma membrane | 51.89 | 51.47 |
CDY03280 | Canola | plasma membrane | 54.32 | 51.28 |
Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 53.78 | 51.16 |
TraesCS3D01G174800.1 | Wheat | plasma membrane | 53.51 | 50.9 |
TraesCS3B01G199200.1 | Wheat | plasma membrane | 53.78 | 50.9 |
Bra034473.1-P | Field mustard | extracellular, golgi, plasma membrane | 25.41 | 50.81 |
HORVU3Hr1G033800.1 | Barley | plastid | 53.78 | 50.38 |
TraesCS3A01G167000.1 | Wheat | plasma membrane | 53.51 | 49.13 |
CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.81 | 48.78 |
Bra034474.1-P | Field mustard | peroxisome | 28.65 | 48.62 |
CDY24881 | Canola | extracellular | 24.86 | 47.92 |
EER99979 | Sorghum | plastid | 53.78 | 47.38 |
Os01t0247700-01 | Rice | extracellular, plasma membrane | 43.78 | 46.69 |
Os05t0269200-00 | Rice | cytosol, golgi, plasma membrane | 49.73 | 46.12 |
HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 30.27 | 41.03 |
CDY19523 | Canola | cytosol, extracellular, plasma membrane | 12.97 | 37.8 |
HORVU2Hr1G118150.1 | Barley | peroxisome | 28.92 | 35.79 |
CDY12934 | Canola | cytosol, extracellular, plasma membrane | 13.24 | 35.77 |
HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 31.62 | 35.45 |
CDY08625 | Canola | plasma membrane | 18.11 | 33.33 |
KRH38307 | Soybean | golgi, plasma membrane, plastid | 28.92 | 25.85 |
KRH35219 | Soybean | cytosol | 35.14 | 23.17 |
KRH38311 | Soybean | cytosol, nucleus, plasma membrane | 34.32 | 21.27 |
KRH08776 | Soybean | cytosol, nucleus, plasma membrane | 34.32 | 21.27 |
KRH08775 | Soybean | cytosol, nucleus, plasma membrane | 33.51 | 21.23 |
CDX97407 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
Gene3D:1.50.10.150 | EntrezGene:100794114 | MapMan:24.3.10 | EMBL:ACUP02004104 | EnsemblPlantsGene:GLYMA_06G307500 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR038665 |
UniProt:K7KYC4 | EnsemblPlants:KRH56158 | ProteinID:KRH56158 | ProteinID:KRH56158.1 | PFAM:PF03595 | PANTHER:PTHR31269 |
PANTHER:PTHR31269:SF4 | TMHMM:TMhelix | UniParc:UPI0002339CF9 | InterPro:Voltage-dep_anion_channel | InterPro:Voltage-dep_anion_channel_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:49620844..49623341
Molecular Weight (calculated)
41813.0 Da
IEP (calculated)
9.911
GRAVY (calculated)
0.591
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDNEKQHLQ PHVELPIDVS VSKTQSNCKP QIQIQSLSSI LTQFHAGYFR ISLSLASQAV LLKILIEPIQ DAHALRRLFS SIPSSVHTLL WFLALFTVAT
101: LSFLYILKCL LHFDMIKDEF LSHVGVNYLF IPWISWLLLL ESSPFLSPTK LYYKVLWWVF VSPLVMLDVK IYGQWFTKGK RFLSIGANPT SQLSVIGNLV
201: GAQAAAQMGW KESALCMFSL GITHYLVLFV TLYQRLAGNN SVPSMLRPVF FLFFAAHSMA SLAWNSICGK FDTTCKMLFF LSFFLFMSLV SRPLLFKKSM
301: KKFNVAWWAY SFPLTALALA SAEYEHEVKG VMAHVIMFVL SSVSVLVSLI LMVITALNIS KHVLSRSQPS
101: LSFLYILKCL LHFDMIKDEF LSHVGVNYLF IPWISWLLLL ESSPFLSPTK LYYKVLWWVF VSPLVMLDVK IYGQWFTKGK RFLSIGANPT SQLSVIGNLV
201: GAQAAAQMGW KESALCMFSL GITHYLVLFV TLYQRLAGNN SVPSMLRPVF FLFFAAHSMA SLAWNSICGK FDTTCKMLFF LSFFLFMSLV SRPLLFKKSM
301: KKFNVAWWAY SFPLTALALA SAEYEHEVKG VMAHVIMFVL SSVSVLVSLI LMVITALNIS KHVLSRSQPS
001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
Arabidopsis Description
SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.