Factsheet for Os01t0247700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G199200.1	Wheat	plasma membrane	73.49	65.22
HORVU3Hr1G033800.1	Barley	plastid	73.78	64.81
TraesCS3D01G174800.1	Wheat	plasma membrane	72.33	64.52
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	72.05	64.27
TraesCS3A01G167000.1	Wheat	plasma membrane	74.06	63.77
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	48.7	61.9
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	59.94	61.54
EER99979	Sorghum	plastid	70.61	58.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum	55.33	53.19
HORVU2Hr1G118150.1	Barley	peroxisome	45.82	53.18
Os05t0269200-00	Rice	cytosol, golgi, plasma membrane	61.1	53.13
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	58.21	53.02
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	47.26	52.4
GSMUA_Achr9P21990_001	Banana	plasma membrane	57.06	52.38
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	48.41	50.91
KRH25357	Soybean	plasma membrane	43.52	50.5
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	55.62	50.26
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	50.14	48.74
KRH51762	Soybean	mitochondrion	42.94	47.45
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.95	46.34
KRH61084	Soybean	golgi, peroxisome, plasma membrane	49.86	44.7
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	49.57	44.56
KRH56158	Soybean	golgi, peroxisome, plasma membrane	46.69	43.78
Bra034474.1-P	Field mustard	peroxisome	27.09	43.12
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.24	42.09
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	47.26	41.21
AT1G62262.1	Thale cress	plasma membrane	43.23	41.1
Bra027058.1-P	Field mustard	plasma membrane	43.52	39.63
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	44.09	39.53
CDY12936	Canola	plasma membrane	43.23	39.37
AT1G62280.1	Thale cress	plasma membrane	43.52	39.22
CDY08628	Canola	golgi, peroxisome, plasma membrane	43.52	39.02
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.38	38.93
CDY03280	Canola	plasma membrane	43.52	38.52
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.33	38.34
KRH02037	Soybean	plasma membrane	40.63	37.8
CDY19522	Canola	endoplasmic reticulum	21.61	37.69
KRH51125	Soybean	plasma membrane	40.63	37.6
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.61	36.95
CDY19523	Canola	cytosol, extracellular, plasma membrane	12.68	34.65
CDY12934	Canola	cytosol, extracellular, plasma membrane	12.68	32.12
CDY08625	Canola	plasma membrane	17.87	30.85
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	15.27	28.65
CDY24881	Canola	extracellular	15.27	27.6
Os07t0181100-01	Rice	cytosol, peroxisome, plasma membrane	35.73	19.87
Os05t0219900-01	Rice	cytosol, peroxisome, plasma membrane, plastid	34.29	19.13
Os01t0385400-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	34.29	19.04
Os01t0623200-01	Rice	cytosol, peroxisome, plasma membrane	35.73	18.84
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	33.72	17.84
Os02t0530100-01	Rice	mitochondrion	9.22	11.27
CDX97407	Canola	cytosol	0.29	0.68

Protein Annotations

EnsemblPlants:Os01t0247700-01	EnsemblPlantsGene:Os01g0247700	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF4	PFAM:PF03595	ProteinID:BAS71322.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000393AF20	UniProt:A0A0P0V174	MapMan:24.3.10	:	:	:

Description

Similar to inner membrane transport protein. (Os01t0247700-01)

Coordinates

chr1:-:8132699..8135454

Molecular Weight (calculated)

38312.3 Da

IEP (calculated)

10.960

GRAVY (calculated)

0.533

Length

347 amino acids

Sequence
(BLAST)

001: SIDRSSRVAM DTSSRSLKPF AASSIDGGVA STKPAAAPVV ARFGMLTRFH AGYFRISLAL SGQALLWRTL SDASTDPRAL GPVVRSLPSA AFVLLWSLAL
101: LTLVALCALY AARCLLRFPA VRAEFRHHVA MNYLFAPWIS WLLLLQAAPP LLLRPDARPY RALWWAFSLP ILALDVKVYG QWFTRGRKFL SMVANPASHI
201: TVIGNLVTAR AAARMGWHEG AVAMFAVGAA HYLVLFVTLY QRFLGSDSLP AMLRPVFFLF FAAPSMASLA WDAISASFDT CCKMLFFLSL FLFASLVIKL
301: ALHSKSLAFT PLYCICTQTP RMNVMSQHGI RSKPSHFLSN AQDKFHF

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.