Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12934 | Canola | cytosol, extracellular, plasma membrane | 100.0 | 92.7 |
| CDY00628 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.37 | 60.98 |
| CDY08625 | Canola | plasma membrane | 55.91 | 35.32 |
| AT1G62262.1 | Thale cress | plasma membrane | 67.72 | 23.56 |
| CDY39794 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 59.06 | 19.38 |
| CDY12936 | Canola | plasma membrane | 56.69 | 18.9 |
| CDY03280 | Canola | plasma membrane | 56.69 | 18.37 |
| CDY08628 | Canola | golgi, peroxisome, plasma membrane | 55.12 | 18.09 |
| KRH25357 | Soybean | plasma membrane | 36.22 | 15.38 |
| VIT_18s0001g13440.t01 | Wine grape | golgi, plasma membrane, vacuole | 37.8 | 15.34 |
| KRH51762 | Soybean | mitochondrion | 35.43 | 14.33 |
| Solyc07g051950.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 38.58 | 13.73 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 36.22 | 13.61 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 40.16 | 13.49 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 39.37 | 13.12 |
| KRH56158 | Soybean | golgi, peroxisome, plasma membrane | 37.8 | 12.97 |
| KRH61084 | Soybean | golgi, peroxisome, plasma membrane | 39.37 | 12.92 |
| VIT_12s0059g00860.t01 | Wine grape | peroxisome, plasma membrane, plastid | 38.58 | 12.69 |
| Os01t0247700-01 | Rice | extracellular, plasma membrane | 34.65 | 12.68 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 34.65 | 12.19 |
| Solyc03g031590.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 34.65 | 11.8 |
| TraesCS3B01G199200.1 | Wheat | plasma membrane | 36.22 | 11.76 |
| TraesCS3D01G174800.1 | Wheat | plasma membrane | 35.43 | 11.57 |
| KRH51125 | Soybean | plasma membrane | 33.86 | 11.47 |
| HORVU3Hr1G033800.1 | Barley | plastid | 35.43 | 11.39 |
| TraesCS3A01G167000.1 | Wheat | plasma membrane | 35.43 | 11.17 |
| Zm00001d039241_P001 | Maize | golgi, plasma membrane, plastid | 33.86 | 11.05 |
| KRH02037 | Soybean | plasma membrane | 32.28 | 10.99 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 33.07 | 10.94 |
| Solyc04g080990.1.1 | Tomato | cytosol, golgi, peroxisome | 33.86 | 10.8 |
| Os05t0269200-00 | Rice | cytosol, golgi, plasma membrane | 33.86 | 10.78 |
| EER99979 | Sorghum | plastid | 33.86 | 10.24 |
| HORVU5Hr1G066120.1 | Barley | extracellular, plasma membrane | 21.26 | 9.89 |
| HORVU3Hr1G098700.1 | Barley | extracellular, plasma membrane | 21.26 | 8.18 |
| HORVU2Hr1G118150.1 | Barley | peroxisome | 17.32 | 7.36 |
| CDX97408 | Canola | cytosol, peroxisome, plasma membrane, plastid | 24.41 | 6.18 |
| CDX84361 | Canola | plasma membrane | 18.9 | 6.15 |
| CDX98059 | Canola | cytosol, peroxisome, plastid | 26.77 | 6.13 |
| CDY30084 | Canola | plasma membrane | 26.77 | 5.8 |
| CDY29871 | Canola | plastid | 21.26 | 5.43 |
| CDX92855 | Canola | plastid | 21.26 | 5.42 |
| CDY14262 | Canola | plastid | 23.62 | 4.63 |
| CDY19015 | Canola | plastid | 21.26 | 4.24 |
| CDX89215 | Canola | plastid | 21.26 | 4.24 |
| CDY44267 | Canola | cytosol | 20.47 | 4.23 |
| CDX87147 | Canola | cytosol, nucleus, plasma membrane | 20.47 | 4.17 |
| CDX80404 | Canola | cytosol | 20.47 | 4.09 |
| CDY46973 | Canola | cytosol | 19.68 | 4.05 |
| CDY00627 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 5.51 | 3.63 |
| CDY19522 | Canola | endoplasmic reticulum | 5.51 | 3.52 |
| CDX88065 | Canola | cytosol | 20.47 | 3.49 |
| CDY12933 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 5.51 | 3.45 |
| CDY24881 | Canola | extracellular | 2.36 | 1.56 |
| CDX97407 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.50.10.150 | MapMan:35.1 | GO:A0A078G4D6 | UniProt:A0A078G4D6 | EnsemblPlants:CDY19523 | ProteinID:CDY19523 |
| ProteinID:CDY19523.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0006873 | GO:GO:0008150 | GO:GO:0008308 | GO:GO:0009987 | GO:GO:0015698 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019725 | GO:GO:0098656 | EnsemblPlantsGene:GSBRNA2T00009149001 | InterPro:IPR038665 | PANTHER:PTHR31269 |
| PANTHER:PTHR31269:SF7 | InterPro:SLAC/SLAH | TMHMM:TMhelix | UniParc:UPI0004EF13ED | InterPro:Voltage-dep_anion_channel_sf | : |
Description
BnaC09g13800DBnaC09g13800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4D6]
Coordinates
chrLK032097:-:279279..279744
Molecular Weight (calculated)
14825.6 Da
IEP (calculated)
8.682
GRAVY (calculated)
0.579
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEILVVPCQE IQIKIDYPIS RKKKRYTNLA DAEPIVLMSV LSSLHAGYFR ISLSLCSQAL LWKTMVHLHS DLPSMAFHLL WYLALATHVS LCFLYAFKCI
101: FFFDLLLCWN HTAFCTRRYF GCLLLRS
101: FFFDLLLCWN HTAFCTRRYF GCLLLRS
001: MEIPSQEIHI MIDNTISRRK ERKTNLADAE PIVLMSVLSS LHAGYFRISL SLCSQALLWK IMVHLHSELP SMAYYLLWYL ALATQVSLCF LYAFKCIFLF
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
101: DMVKEEFSHY IGVNYLYAPS ISCLLLLQSA PMIEPHSVLY QTLFWIFAVP VLTLDTKLYG QWFTTEKRFL SIMANPASQV SVIANLVAAR GAAEMGWKEC
201: ALCLFSLGMV HYLVIFVTLY QRLPGGNNFP TTLRPVFFLF FAAPATASLA WNSICGNFDT IAKMLFFLSL FIFISLVCRP NLLKKSIKRF NVAWWAYSFP
301: ITFLALNSVQ YAQEVKDHVA SVLMFIFSSM SVLIFISVML LTAANSKRLL RRDHVLWSST GPKDK
Arabidopsis Description
SLAH4S-type anion channel SLAH4 [Source:UniProtKB/Swiss-Prot;Acc:A8MRV9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.