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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P07610_001 Banana golgi, mitochondrion, plasma membrane, plastid 55.76 61.54
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 30.03 58.03
Solyc07g051950.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 54.96 57.42
CDY19522 Canola endoplasmic reticulum 29.76 55.78
Bra036662.1-P Field mustard endoplasmic reticulum, plasma membrane 36.19 55.33
GSMUA_Achr1P25300_001 Banana cytosol, endoplasmic reticulum, plasma membrane 56.3 55.12
AT1G62280.1 Thale cress plasma membrane 56.57 54.81
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 29.76 54.68
GSMUA_Achr10P... Banana endoplasmic reticulum 52.55 54.29
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 57.91 54.27
AT1G62262.1 Thale cress plasma membrane 53.08 54.25
GSMUA_Achr9P21990_001 Banana plasma membrane 54.69 53.97
CDY12936 Canola plasma membrane 54.42 53.28
Bra027058.1-P Field mustard plasma membrane 54.42 53.28
GSMUA_Achr7P17640_001 Banana golgi, plasma membrane, plastid 54.42 52.86
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 53.62 51.68
Bra034473.1-P Field mustard extracellular, golgi, plasma membrane 25.47 51.35
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 11.26 51.22
KRH02037 Soybean plasma membrane 51.21 51.21
KRH51125 Soybean plasma membrane 51.47 51.2
CDY08628 Canola golgi, peroxisome, plasma membrane 53.08 51.16
CDY03280 Canola plasma membrane 53.35 50.77
TraesCS3D01G174800.1 Wheat plasma membrane 52.55 50.39
TraesCS3B01G199200.1 Wheat plasma membrane 52.81 50.38
Zm00001d039241_P001 Maize golgi, plasma membrane, plastid 52.28 50.13
HORVU3Hr1G033800.1 Barley plastid 53.08 50.13
TraesCS3A01G167000.1 Wheat plasma membrane 52.55 48.64
CDY24881 Canola extracellular 24.66 47.92
Bra034474.1-P Field mustard peroxisome 27.35 46.79
EER99979 Sorghum plastid 51.74 45.95
Os05t0269200-00 Rice cytosol, golgi, plasma membrane 48.79 45.61
Os01t0247700-01 Rice extracellular, plasma membrane 42.09 45.24
HORVU5Hr1G066120.1 Barley extracellular, plasma membrane 28.42 38.83
CDY08625 Canola plasma membrane 18.77 34.83
HORVU2Hr1G118150.1 Barley peroxisome 27.88 34.78
CDY19523 Canola cytosol, extracellular, plasma membrane 11.8 34.65
HORVU3Hr1G098700.1 Barley extracellular, plasma membrane 30.03 33.94
CDY12934 Canola cytosol, extracellular, plasma membrane 12.06 32.85
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 37.0 23.67
Solyc08g079770.2.1 Tomato cytosol, peroxisome, plastid 35.12 23.6
Solyc09g014610.2.1 Tomato plasma membrane 36.73 23.06
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 36.19 21.88
CDX97407 Canola cytosol 0.27 0.68
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0006810GO:GO:0006873GO:GO:0008150GO:GO:0008308GO:GO:0009987GO:GO:0015698
GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0055085GO:GO:0098656InterPro:IPR038665
UniProt:K4BFD1PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF7InterPro:SLAC/SLAHEnsemblPlantsGene:Solyc03g031590.2
EnsemblPlants:Solyc03g031590.2.1TMHMM:TMhelixUniParc:UPI0002769285InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg
Description
No Description!
Coordinates
chr3:-:4072196..4074800
Molecular Weight (calculated)
42527.6 Da
IEP (calculated)
9.640
GRAVY (calculated)
0.508
Length
373 amino acids
Sequence
(BLAST)
001: MGEQVFESTI KVTISDDDNN ITKDHVTKKS TSSNISPLTK LHAGYFRISL SLGGQTLLWK VLTQHLDKSQ TLQHKFHSLP STTFLLLWWI SLCTLMLLSF
101: LYILRCIFHF KLVKSEFLHP IGVNYLFAPW ISWLLLLQSI PFTIPNLDSC QFVWWIFVVP VVILDVKIYG QWFTTEKRFL SMVANPTSQL SVLGNLVGAW
201: IASKMEWKES AICIFTLGLT HYLVVFVTLY QRLSGSNRLP AMLRPTFFLF VAAPSMASLA WASISGDFDM PCRMLFFLSL FLFTSLVCRP ALFKKSMRKF
301: NVAWWAYSFP LTFLALASAQ YAHQVEGHVA NGLMLLLSAL SVLVFVGLTV STALNLDMLL SDHDRYLNFT KRT
Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)
001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
Arabidopsis Description
SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.