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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P07610_001 Banana golgi, mitochondrion, plasma membrane, plastid 61.34 64.79
GSMUA_Achr10P... Banana endoplasmic reticulum 61.06 60.39
GSMUA_Achr7P17640_001 Banana golgi, plasma membrane, plastid 62.47 58.07
GSMUA_Achr9P21990_001 Banana plasma membrane 61.34 57.94
GSMUA_Achr1P25300_001 Banana cytosol, endoplasmic reticulum, plasma membrane 61.34 57.48
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 30.81 56.99
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 12.89 56.1
Solyc03g031590.2.1 Tomato cytosol, peroxisome, plasma membrane 57.42 54.96
TraesCS3D01G174800.1 Wheat plasma membrane 58.82 53.98
CDY19522 Canola endoplasmic reticulum 29.97 53.77
Zm00001d039241_P001 Maize golgi, plasma membrane, plastid 58.54 53.73
TraesCS3B01G199200.1 Wheat plasma membrane 58.82 53.71
Solyc04g080990.1.1 Tomato cytosol, golgi, peroxisome 59.38 53.27
HORVU3Hr1G033800.1 Barley plastid 58.54 52.91
Bra036662.1-P Field mustard endoplasmic reticulum, plasma membrane 36.13 52.87
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 29.97 52.71
AT1G62262.1 Thale cress plasma membrane 53.78 52.6
CDY12936 Canola plasma membrane 56.02 52.49
Bra027058.1-P Field mustard plasma membrane 56.02 52.49
AT1G62280.1 Thale cress plasma membrane 56.3 52.21
TraesCS3A01G167000.1 Wheat plasma membrane 58.82 52.11
CDY08628 Canola golgi, peroxisome, plasma membrane 55.18 50.9
Os01t0247700-01 Rice extracellular, plasma membrane 48.74 50.14
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 54.34 50.13
CDY03280 Canola plasma membrane 54.06 49.23
EER99979 Sorghum plastid 57.7 49.05
Bra034474.1-P Field mustard peroxisome 29.69 48.62
Os05t0269200-00 Rice cytosol, golgi, plasma membrane 54.06 48.37
Bra034473.1-P Field mustard extracellular, golgi, plasma membrane 24.65 47.57
CDY24881 Canola extracellular 24.37 45.31
HORVU5Hr1G066120.1 Barley extracellular, plasma membrane 32.49 42.49
CDY19523 Canola cytosol, extracellular, plasma membrane 13.73 38.58
HORVU2Hr1G118150.1 Barley peroxisome 31.93 38.13
HORVU3Hr1G098700.1 Barley extracellular, plasma membrane 34.17 36.97
CDY12934 Canola cytosol, extracellular, plasma membrane 13.73 35.77
CDY08625 Canola plasma membrane 19.05 33.83
Solyc08g079770.2.1 Tomato cytosol, peroxisome, plastid 39.22 25.23
Solyc09g014610.2.1 Tomato plasma membrane 37.82 22.73
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 36.41 22.3
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 37.53 21.72
CDX97407 Canola cytosol 0.28 0.68
Protein Annotations
EnsemblPlants:Solyc07g051950.2.1EnsemblPlantsGene:Solyc07g051950.2Gene3D:1.50.10.150GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR038665InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269PANTHER:PTHR31269:SF4PFAM:PF03595SEG:segTMHMM:TMhelixUniParc:UPI000276B638
UniProt:K4CF97MapMan:24.3.10::::
Description
No Description!
Coordinates
chr7:-:60504547..60507228
Molecular Weight (calculated)
40627.5 Da
IEP (calculated)
10.152
GRAVY (calculated)
0.597
Length
357 amino acids
Sequence
(BLAST)
001: MDTKESQKNH FSSILSRFHA GYFRISLSLC SQALLWKTLS DPSDDIHKIR NIFRMLPSAA FILLWSLALF SLISLSSLYL LRIFFHFDMV KREFLHHVGV
101: NYLYAPWISW LMLLQATPFF KHEGVCFFIL WWIFIVPILA LDIKIYGQWI TKGKRFLSGV ANPTSQLSVI GNLVGARAAA EMGWNESALL LFAIGMSHYL
201: VLFVTLYQRL PGSSSIPAML RPVFFLFLAA PSMASLAWNS IYGKFDSSSK MLFFLSIFLF LSLVSRPALF KRSMRKFNVS WWAYSFPLTV MAMASTKYAQ
301: EMKNTASHIL MLLLSALSVI VSLVLMIFTA LHSTSLLPCD ADDSMHCISI NQRTSIV
Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)
001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN
Arabidopsis Description
SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.