Factsheet for TraesCS3A01G167000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G174800.1	Wheat	plasma membrane	93.3	96.66
HORVU3Hr1G033800.1	Barley	plastid	94.54	96.46
TraesCS3B01G199200.1	Wheat	plasma membrane	93.55	96.42
Zm00001d039241_P001	Maize	golgi, plasma membrane, plastid	72.7	75.32
Os01t0247700-01	Rice	extracellular, plasma membrane	63.77	74.06
GSMUA_Achr6P07610_001	Banana	golgi, mitochondrion, plasma membrane, plastid	62.03	73.96
EER99979	Sorghum	plastid	72.21	69.29
HORVU5Hr1G066120.1	Barley	extracellular, plasma membrane	45.91	67.77
GSMUA_Achr10P...	Banana	endoplasmic reticulum	59.55	66.48
GSMUA_Achr1P25300_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	61.04	64.57
GSMUA_Achr9P21990_001	Banana	plasma membrane	59.55	63.49
GSMUA_Achr7P17640_001	Banana	golgi, plasma membrane, plastid	59.06	61.98
HORVU2Hr1G118150.1	Barley	peroxisome	44.17	59.53
Solyc07g051950.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	52.11	58.82
KRH51762	Soybean	mitochondrion	45.41	58.28
CDY00627	Canola	endoplasmic reticulum, extracellular, plasma membrane	27.05	56.48
VIT_12s0059g00860.t01	Wine grape	peroxisome, plasma membrane, plastid	53.6	55.96
HORVU3Hr1G098700.1	Barley	extracellular, plasma membrane	45.66	55.76
KRH61084	Soybean	golgi, peroxisome, plasma membrane	52.36	54.52
CDY19522	Canola	endoplasmic reticulum	26.8	54.27
Bra036662.1-P	Field mustard	endoplasmic reticulum, plasma membrane	32.51	53.69
KRH56158	Soybean	golgi, peroxisome, plasma membrane	49.13	53.51
CDY12933	Canola	endoplasmic reticulum, extracellular, plasma membrane	26.8	53.2
Solyc03g031590.2.1	Tomato	cytosol, peroxisome, plasma membrane	48.64	52.55
VIT_18s0001g13440.t01	Wine grape	golgi, plasma membrane, vacuole	40.69	52.4
KRH25357	Soybean	plasma membrane	37.97	51.17
Solyc04g080990.1.1	Tomato	cytosol, golgi, peroxisome	50.37	51.01
AT1G62262.1	Thale cress	plasma membrane	45.41	50.14
Bra027058.1-P	Field mustard	plasma membrane	46.9	49.61
CDY12936	Canola	plasma membrane	46.9	49.61
AT1G62280.1	Thale cress	plasma membrane	47.15	49.35
CDY39794	Canola	endoplasmic reticulum, nucleus, plasma membrane	47.15	49.1
Bra034473.1-P	Field mustard	extracellular, golgi, plasma membrane	22.33	48.65
CDY08628	Canola	golgi, peroxisome, plasma membrane	45.66	47.55
CDY03280	Canola	plasma membrane	46.15	47.45
KRH02037	Soybean	plasma membrane	43.67	47.19
KRH51125	Soybean	plasma membrane	43.67	46.93
CDY24881	Canola	extracellular	21.84	45.83
CDY00628	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.18	45.12
Bra034474.1-P	Field mustard	peroxisome	23.33	43.12
CDY19523	Canola	cytosol, extracellular, plasma membrane	11.17	35.43
CDY12934	Canola	cytosol, extracellular, plasma membrane	11.41	33.58
CDY08625	Canola	plasma membrane	14.89	29.85
TraesCS1A01G423900.1	Wheat	plasma membrane	34.74	27.78
TraesCS1A01G423000.1	Wheat	cytosol, peroxisome, plasma membrane	36.48	27.22
TraesCS3A01G028100.1	Wheat	cytosol, peroxisome, plasma membrane	35.73	27.07
TraesCS1A01G424400.1	Wheat	plasma membrane, plastid	34.49	24.3
TraesCS1A01G424500.1	Wheat	plasma membrane	35.73	24.12
TraesCS2A01G398000.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	32.75	22.96
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	34.24	22.77
TraesCS3A01G225100.1	Wheat	plasma membrane	35.48	21.0
TraesCS1A01G127500.1	Wheat	plasma membrane	33.99	20.98
CDX97407	Canola	cytosol	0.5	1.35

Protein Annotations

EnsemblPlants:TraesCS3A01G167000.1	EnsemblPlantsGene:TraesCS3A01G167000	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF4	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:171549064..171551020

Molecular Weight (calculated)

44499.1 Da

IEP (calculated)

10.504

GRAVY (calculated)

0.509

Length

403 amino acids

Sequence
(BLAST)

001: MQSKPHSPSP LPSIDRSITM ETSSDSLKPL GPKGAGLAEA GDGGTMLKAS TAPNKPPRPV ASRFAMLTRF HAGYFRISLA LSGQALLWRT LSDRSTDPSA
101: LHPLVQSLPS AAFVLLWSLA LLTLFALCVL YVARCVVRLP AVRAEFRHHV GMNYLFAPWI SWLLLLQATP FLRPDAPSYH MLWWAFSLPI LVLDVKVYGQ
201: WFTRGRKFLS MVANPASHMT VIANLMTARA AAKMGWHEGA VAMFAVGAAH YLVLFVTLYQ RFLGSDSLPA MLRPVFFLFF AAPSMASLAW CSISMSFDTG
301: CKMLFFLSMF LFASLVSRPT LFKRAMRRFS VAWWAYSFPL TLLALASAEY AQEVREPAAS VLMLALAVLS VLVTLALMVF TALRPNDLLP HDDPFFAATL
401: PAR

Best Arabidopsis Sequence Match ( AT1G62280.1 )
(BLAST)

001: MEIPRQEIHI EIDNSIPSSK EFKTGLADAK PVVLMSALRS LHAGYFRISL SLCSQALLWK IMIAPESPSM SHMHSKLPSM AFHLLWYLAL VTQVSLCFLY
101: ALKCIFFFDK VKEEFLHYIG VNYLYAPSIS WLLMLQSAPM MEPNSVLYQT LFWIFAVPVL TLDIKLYGQW FTTEKRFLSM LANPASQVSV IANLVAARGA
201: AEMGWNECAL CMFSLGMVHY LVIFVTLYQR LPGGNNFPAK LRPIFFLFVA APAMASLAWN SICGTFDAVA KMLFFLSLFI FMSLVCRPNL FKKSMKRFNV
301: AWWAYSFPLT FLALDSVQYA QEVKDPVGSG LMLIFSSISV LIFLGMMVLT AANSNRLLRH DPVLGSATDP KDKQKTLSLN ATNQN

Arabidopsis Description

SLAH1SLAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8P4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.