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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46973 Canola cytosol 97.72 97.09
CDX87147 Canola cytosol, nucleus, plasma membrane 78.99 77.85
CDX80404 Canola cytosol 79.48 76.73
AT5G24030.1 Thale cress cytosol, endoplasmic reticulum, nucleus 76.71 74.17
CDX88065 Canola cytosol 79.64 65.64
HORVU5Hr1G055480.1 Barley golgi 26.71 61.65
Zm00001d010430_P001 Maize plasma membrane 32.25 60.55
GSMUA_Achr5P06840_001 Banana cytosol, endoplasmic reticulum, peroxisome 38.76 59.2
CDX84361 Canola plasma membrane 36.81 57.95
KRH38307 Soybean golgi, plasma membrane, plastid 38.44 57.0
PGSC0003DMT400021864 Potato cytosol, peroxisome, plastid 49.35 54.59
KRH08776 Soybean cytosol, nucleus, plasma membrane 52.61 54.1
KRH38311 Soybean cytosol, nucleus, plasma membrane 52.12 53.6
PGSC0003DMT400074359 Potato plasma membrane 51.95 53.34
TraesCS1B01G388600.1 Wheat plasma membrane 31.92 52.55
GSMUA_Achr9P05400_001 Banana plastid 37.78 52.02
Solyc06g036440.1.1 Tomato cytosol, peroxisome, plasma membrane 51.79 51.54
Solyc09g014610.2.1 Tomato plasma membrane 48.86 50.51
Solyc03g007770.2.1 Tomato cytosol, nucleus, plasma membrane 47.88 50.43
CDX92855 Canola plastid 40.88 50.4
CDX97408 Canola cytosol, peroxisome, plasma membrane, plastid 41.21 50.4
TraesCSU01G204200.1 Wheat plasma membrane 21.66 50.38
VIT_16s0050g01860.t01 Wine grape cytosol, nucleus, plasma membrane 51.14 50.08
CDY29871 Canola plastid 40.23 49.7
KRH08775 Soybean cytosol, nucleus, plasma membrane 46.42 48.8
PGSC0003DMT400051388 Potato cytosol, nucleus, plasma membrane 48.7 48.54
GSMUA_Achr4P15620_001 Banana cytosol, peroxisome, plasma membrane 40.07 48.33
TraesCS1A01G423900.1 Wheat plasma membrane 38.44 46.83
TraesCS1D01G126500.1 Wheat cytosol, peroxisome, plasma membrane 45.6 46.36
TraesCS3B01G178600.1 Wheat cytosol, peroxisome, plasma membrane 45.28 46.18
Os01t0385400-01 Rice cytosol, endoplasmic reticulum, plasma membrane 46.58 45.76
Os05t0219900-01 Rice cytosol, peroxisome, plasma membrane, plastid 46.25 45.66
GSMUA_Achr6P31880_001 Banana cytosol, endoplasmic reticulum, plasma membrane 44.46 45.65
TraesCS3D01G159600.1 Wheat cytosol, peroxisome, plasma membrane 44.79 45.61
TraesCS3A01G151400.1 Wheat cytosol, peroxisome, plasma membrane 44.63 45.21
GSMUA_Achr7P14260_001 Banana cytosol 43.81 45.13
KXG22629 Sorghum cytosol, peroxisome, plasma membrane 37.62 44.77
TraesCS1B01G147400.1 Wheat plasma membrane 46.25 44.72
TraesCS1A01G423000.1 Wheat cytosol, peroxisome, plasma membrane 39.25 44.63
TraesCS1B01G455100.1 Wheat plasma membrane 38.93 44.59
Zm00001d037816_P001 Maize plasma membrane 45.77 44.18
TraesCS1D01G432800.1 Wheat plasma membrane 41.69 44.14
OQU77636 Sorghum cytosol, peroxisome, plasma membrane 45.11 44.11
Zm00001d009706_P001 Maize cytosol, peroxisome, plasma membrane 37.13 43.93
TraesCS3B01G254700.1 Wheat cytosol, peroxisome, plasma membrane 43.97 43.62
TraesCS3A01G028100.1 Wheat cytosol, peroxisome, plasma membrane 37.78 43.61
KXG28459 Sorghum cytosol, peroxisome, plasma membrane 37.3 43.54
Zm00001d041653_P001 Maize plastid 42.02 43.0
TraesCS1A01G127500.1 Wheat plasma membrane 45.6 42.88
TraesCSU01G001600.1 Wheat plasma membrane 42.51 42.79
TraesCS1D01G433100.1 Wheat plasma membrane 40.88 42.76
Zm00001d044181_P001 Maize plasma membrane 43.81 42.7
TraesCS3D01G228400.1 Wheat cytosol, nucleus, plasma membrane 43.65 42.68
TraesCS1D01G432900.1 Wheat plasma membrane 43.0 42.51
TraesCS1D01G433200.1 Wheat plasma membrane 42.51 42.3
TraesCS1A01G424500.1 Wheat plasma membrane 41.04 42.21
TraesCS1B01G456200.1 Wheat plasma membrane 43.16 42.2
TraesCS1B01G456400.1 Wheat plasma membrane 41.37 42.19
TraesCS1D01G432700.1 Wheat cytosol, peroxisome, plasma membrane 41.21 41.96
Os01t0623200-01 Rice cytosol, peroxisome, plasma membrane 44.95 41.95
TraesCSU01G001400.1 Wheat plasma membrane, plastid 42.83 41.88
TraesCS1B01G456100.1 Wheat cytosol, peroxisome, plasma membrane 40.72 41.81
Zm00001d011393_P001 Maize cytosol, peroxisome, plasma membrane 43.16 41.8
TraesCS1B01G456500.1 Wheat plasma membrane 40.88 41.69
TraesCS3B01G018300.1 Wheat mitochondrion 37.13 41.68
Zm00001d009705_P001 Maize plasma membrane 38.76 41.68
OQU77336 Sorghum cytosol 35.67 41.63
TraesCS1B01G456300.1 Wheat plasma membrane 41.37 41.03
KXG24404 Sorghum cytosol, peroxisome, plasma membrane 42.67 40.68
Os01t0226600-02 Rice endoplasmic reticulum, peroxisome, plasma membrane 43.0 40.24
TraesCS1A01G424400.1 Wheat plasma membrane, plastid 37.46 40.21
Os07t0181100-01 Rice cytosol, peroxisome, plasma membrane 40.72 40.06
EES20021 Sorghum plastid 40.39 39.87
Zm00001d039150_P001 Maize plasma membrane 39.09 39.87
TraesCS3A01G225100.1 Wheat plasma membrane 44.14 39.79
CDY19015 Canola plastid 41.21 39.72
TraesCS3D01G017800.1 Wheat mitochondrion, plasma membrane 38.44 39.66
TraesCS1D01G432500.1 Wheat plasma membrane 39.58 39.64
TraesCSU01G001500.1 Wheat plasma membrane 43.32 39.52
CDX89215 Canola plastid 40.88 39.4
CDY14262 Canola plastid 41.04 38.89
KXG22628 Sorghum plastid 39.74 38.01
TraesCS1B01G456000.1 Wheat cytosol, peroxisome, plasma membrane 35.5 37.72
Zm00001d039314_P001 Maize plasma membrane 45.44 37.7
CDX98059 Canola cytosol, peroxisome, plastid 33.39 36.94
CDY30084 Canola plasma membrane 33.55 35.15
CDY19522 Canola endoplasmic reticulum 11.24 34.67
KXG31512 Sorghum plasma membrane 44.63 34.25
CDY00627 Canola endoplasmic reticulum, extracellular, plasma membrane 10.59 33.68
CDY12933 Canola endoplasmic reticulum, extracellular, plasma membrane 11.07 33.5
OQU87187 Sorghum plasma membrane 43.49 33.17
CDY24881 Canola extracellular 9.45 30.21
CDY12936 Canola plasma membrane 18.24 29.4
CDY39794 Canola endoplasmic reticulum, nucleus, plasma membrane 18.08 28.68
CDY08628 Canola golgi, peroxisome, plasma membrane 17.43 27.65
CDY03280 Canola plasma membrane 17.59 27.55
CDY00628 Canola endoplasmic reticulum, extracellular, plasma membrane 3.58 26.83
CDY19523 Canola cytosol, extracellular, plasma membrane 4.23 20.47
CDY12934 Canola cytosol, extracellular, plasma membrane 4.4 19.71
CDY08625 Canola plasma membrane 6.35 19.4
CDX97407 Canola cytosol 0.65 2.7
Protein Annotations
Gene3D:1.50.10.150MapMan:24.3.10GO:A0A078I2J0UniProt:A0A078I2J0EnsemblPlants:CDY44267ProteinID:CDY44267
ProteinID:CDY44267.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005215
GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0006139GO:GO:0006355GO:GO:0006810
GO:GO:0006873GO:GO:0008150GO:GO:0008152GO:GO:0008308GO:GO:0009058GO:GO:0009987
GO:GO:0015698GO:GO:0016020GO:GO:0016021GO:GO:0019725GO:GO:0055085GO:GO:0098656
EnsemblPlantsGene:GSBRNA2T00079778001InterPro:IPR038665PFAM:PF03595PANTHER:PTHR31269PANTHER:PTHR31269:SF21InterPro:SLAC/SLAH
TMHMM:TMhelixUniParc:UPI0004EF1A15InterPro:Voltage-dep_anion_channelInterPro:Voltage-dep_anion_channel_sfSEG:seg:
Description
BnaC02g41500DBnaC02g41500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2J0]
Coordinates
chrLK032584:-:38899..41679
Molecular Weight (calculated)
69841.1 Da
IEP (calculated)
8.465
GRAVY (calculated)
-0.071
Length
614 amino acids
Sequence
(BLAST)
001: MEERSKCLQI EVEGELPAML REATTEVVNF DNHKENSIPR PRFISRFHPS HASTSDLNGL EASSSSASKT MEAHHNEDPG MTINHQRKTS LPMPTSLIDH
101: MIADPTSSSS DNNKNGGSTG KSVKFLSQPV TKVPSLYIET CQDNDNDSLR PDNHQHQHHH QQHHQSGQRQ NQKHASHKLM DHRYNSFKTW SGKLERQFTR
201: KPASIPETPN RAKEHLNTNH EAMPVDRYFA ALEGPELETL RSQEEIVLPS EQTWPFLLRF PISTFGVCLG VGSQAIMWKT LATAKPTKFL HVSLWIHRSL
301: WFISVALVLI IATIYLLKII LYFEAVRREY YHPIRINFFF APFISLLFLA LAVPPFIVTD LPQFLWYVLM FPFICLELKI YGQWMSGGAL LGARMGLREG
401: PIFFFTVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WATITGSFNY GSKVCYFIAM FLYFSLAVRI NFFRGIKFSL SWWAYTFPMT
501: GAAIATISYA AVVRNTMTKV LCVILCAIAT LVVFALLVTT IIHVFVLGNL FPNDNAIAIS NRPRSKQTNH HRWLEQFRNV SSETIENYLK FADSDSSNDL
601: EAAIDKIQEN NSAQ
Best Arabidopsis Sequence Match ( AT5G24030.1 )
(BLAST)
001: MEEKPNYVIQ VEEELPTLLR KATTEEMVGF DNYKENGHPF PHSISRFHPS HASTTTLNGQ ETSRSIDTME AHHHNYNETT PWTHQRKPSI SMPTSPNVLM
101: ISDPTTSLSS ENHKNSGSTG KSVKFLSQPM TKVSSLYIES GNGDDDRRQS HDNHHHHLHR QHQSGHHQNQ NQAANKLKDN RYNSFKTWSG KLERQFTRKP
201: ASVEPEAPNR NNQNLNTNEA MPVDRYYDAL EGPELETLRP QEEIVLPNDK KWPFLLRYPI STFGMCLGVS SQAIMWKTLA TAEPTKFLHV PLWINQGLWF
301: ISVALILTIA TIYLLKIILF FEAVRREYYH PIRINFFFAP FISLLFLALG VPPSIITDLP HFLWYLLMFP FICLELKIYG QWMSGGQRRL SRVANPTNHL
401: SVVGNFVGAL LGASMGLREG PIFFYAVGMA HYLVLFVTLY QRLPTNETLP KDLHPVFFLF VAAPSVASMA WAKVTGSFDY GSKVCYFIAI FLYFSLAVRI
501: NFFRGIKFSL SWWAYTFPMT GAAIATIRYA TVVKSTMTQI MCVVLCAIAT LVVFALLVTT IIHAFVLRDL FPNDLAIAIS NRPRPKQNSQ HRWLDQLRNV
601: SSENIENYLK FTDSDSSQSN DVEACNGKTQ ESDSS
Arabidopsis Description
SLAH3S-type anion channel SLAH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV9]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.