Factsheet for TraesCSU01G001400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G432800.1	Wheat	plasma membrane	87.42	94.66
TraesCSU01G001600.1	Wheat	plasma membrane	83.76	86.23
HORVU1Hr1G092640.3	Barley	mitochondrion	87.42	83.43
TraesCSU01G001500.1	Wheat	plasma membrane	89.17	83.21
TraesCSU01G204200.1	Wheat	plasma membrane	34.08	81.06
Zm00001d009705_P001	Maize	plasma membrane	63.53	69.88
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	55.1	66.67
Zm00001d039150_P001	Maize	plasma membrane	63.69	66.45
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	53.98	65.7
EES20021	Sorghum	plastid	64.97	65.59
OQU77336	Sorghum	cytosol	53.18	63.5
KXG22628	Sorghum	plastid	63.22	61.84
CDX84361	Canola	plasma membrane	37.26	60.0
GSMUA_Achr9P05400_001	Banana	plastid	41.4	58.3
KRH38307	Soybean	golgi, plasma membrane, plastid	35.83	54.35
CDY29871	Canola	plastid	42.99	54.33
Bra040840.1-P	Field mustard	plastid	42.99	54.33
CDX92855	Canola	plastid	42.99	54.22
AT4G27970.6	Thale cress	plastid	43.31	52.41
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	41.88	52.39
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	42.36	52.26
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	49.68	52.17
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	45.22	51.17
KRH08776	Soybean	cytosol, nucleus, plasma membrane	47.29	49.75
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	45.86	49.4
Bra026471.1-P	Field mustard	cytosol, plastid	43.79	49.37
KRH38311	Soybean	cytosol, nucleus, plasma membrane	46.82	49.25
KRH08775	Soybean	cytosol, nucleus, plasma membrane	44.9	48.29
PGSC0003DMT400074359	Potato	plasma membrane	45.7	47.99
Solyc09g014610.2.1	Tomato	plasma membrane	45.38	47.98
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	47.77	47.85
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	46.82	47.73
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	46.02	46.84
KRH35219	Soybean	cytosol	41.56	46.52
CDX87147	Canola	cytosol, nucleus, plasma membrane	45.22	45.59
Bra009724.1-P	Field mustard	cytosol	45.06	44.5
CDX80404	Canola	cytosol	45.06	44.5
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	44.9	44.41
Bra029390.1-P	Field mustard	cytosol	44.75	43.91
CDY44267	Canola	cytosol	41.88	42.83
CDY46973	Canola	cytosol	41.88	42.56
CDY19015	Canola	plastid	42.83	42.23
Bra026294.1-P	Field mustard	plastid	42.83	42.16
CDX89215	Canola	plastid	42.68	42.07
Bra010388.1-P	Field mustard	plastid	42.68	41.36
CDY14262	Canola	plastid	42.2	40.9
CDX88065	Canola	cytosol	44.9	37.85

Protein Annotations

EnsemblPlants:TraesCSU01G001400.1	EnsemblPlantsGene:TraesCSU01G001400	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:1823102..1825346

Molecular Weight (calculated)

69147.7 Da

IEP (calculated)

9.188

GRAVY (calculated)

0.171

Length

628 amino acids

Sequence
(BLAST)

001: MASREVSIQM AWVLNGQPWC APSPEPLLLR VPSRAAGISS MEAADAVVSG GRTTKEAAAA SYAETSSSVL ISVPGSPSGL HLAQLGMPPF VRANETGVDA
101: PAVPPSESTV QRAHYPAVPQ LLKQARHHSQ PSLVVRGGGE VPAVPRSDSS RERDRRFDHF KTFSGRLERQ LSSVHRVPQD TDVEKGAASK ISEEDTDEDD
201: AVPTADRYFA ALEGPELETL RPTEVAVLPK DETWPFLLRF PISAFGMCLG VSSQAMLWKT LESEPSTKFL HVHPAANHVL WWISVTLMVI VSITYLLKVV
301: FYFEAVRREF HHPVRVNFFF APSIACLFLV KGVPHPVWEI HHVVWYLLML PILCLDLKIY GQWMSSGERR LSKVANPSNH LAVVGNFVGA LLGARMGLRE
401: LPIFFFGVGL AHYAVLFVTL YQRLPTNVQL PKELHPVFFL FVAAPSVASM AWARISGEFN DGAKLLYFIS LFLYVSLVVR VNLFRGFRFS LAWWAYTFPM
501: TSVALATVLY ASEVDNVLTR SLVVGLSGIA VVTVTGVLVT TMYHAFLRKD LFPNDVSIAI TRRRPKFSKI LAHLRSSSSD VKELVLSIPN LSSSFKQGAY
601: CNDASSNYKT SGGVSESPVA HGLGRAKC

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.