Factsheet for TraesCSU01G001500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G456200.1	Wheat	plasma membrane	87.96	94.27
TraesCSU01G001600.1	Wheat	plasma membrane	80.98	89.34
TraesCSU01G001400.1	Wheat	plasma membrane, plastid	83.21	89.17
HORVU1Hr1G092640.3	Barley	mitochondrion	84.1	86.02
TraesCS1B01G456400.1	Wheat	plasma membrane	74.89	83.72
TraesCSU01G204200.1	Wheat	plasma membrane	32.69	83.33
Zm00001d009705_P001	Maize	plasma membrane	59.44	70.05
Zm00001d039150_P001	Maize	plasma membrane	60.48	67.61
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	51.86	67.24
EES20021	Sorghum	plastid	61.81	66.88
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	51.11	66.67
OQU77336	Sorghum	cytosol	49.93	63.88
KXG22628	Sorghum	plastid	60.48	63.4
CDX84361	Canola	plasma membrane	35.51	61.28
GSMUA_Achr9P05400_001	Banana	plastid	39.52	59.64
CDX92855	Canola	plastid	41.31	55.82
Bra040840.1-P	Field mustard	plastid	41.16	55.73
CDY29871	Canola	plastid	41.16	55.73
KRH38307	Soybean	golgi, plasma membrane, plastid	33.88	55.07
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	47.99	54.01
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	40.27	53.98
AT4G27970.6	Thale cress	plastid	41.31	53.56
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	39.82	52.65
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	43.24	52.43
KRH08776	Soybean	cytosol, nucleus, plasma membrane	45.02	50.75
KRH38311	Soybean	cytosol, nucleus, plasma membrane	44.87	50.59
Bra026471.1-P	Field mustard	cytosol, plastid	41.31	49.91
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	46.06	49.44
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	42.64	49.23
Solyc09g014610.2.1	Tomato	plasma membrane	43.39	49.16
KRH08775	Soybean	cytosol, nucleus, plasma membrane	42.05	48.46
PGSC0003DMT400074359	Potato	plasma membrane	42.79	48.16
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	43.54	47.56
KRH35219	Soybean	cytosol	39.52	47.42
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.39	47.33
CDX87147	Canola	cytosol, nucleus, plasma membrane	42.64	46.07
CDX80404	Canola	cytosol	42.5	44.97
Bra009724.1-P	Field mustard	cytosol	42.5	44.97
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	41.9	44.41
Bra029390.1-P	Field mustard	cytosol	42.2	44.38
CDY19015	Canola	plastid	41.31	43.64
Bra026294.1-P	Field mustard	plastid	41.16	43.42
CDX89215	Canola	plastid	41.01	43.33
CDY44267	Canola	cytosol	39.52	43.32
CDY46973	Canola	cytosol	39.38	42.88
Bra010388.1-P	Field mustard	plastid	41.16	42.75
CDY14262	Canola	plastid	40.71	42.28
CDX88065	Canola	cytosol	42.64	38.52

Protein Annotations

EnsemblPlants:TraesCSU01G001500.1	EnsemblPlantsGene:TraesCSU01G001500	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	SignalP:SignalP-noTM	TIGR:cd09323
TMHMM:TMhelix	MapMan:24.3.10	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:1926406..1928519

Molecular Weight (calculated)

73800.6 Da

IEP (calculated)

8.978

GRAVY (calculated)

0.176

Length

673 amino acids

Sequence
(BLAST)

001: MHIHSLAIHH HLARVLGALL ASAVETKKER VVAMATTEVS IQMAGVLDGQ PGCAPSPEPL LLRVPSQAAG VSSMEAADAV VSGGRTTKKA AAAAYAETPS
101: SVSFSVPGSP SGLHLAQIGM PPSVRDNVGA PAVPLSESKV ERVHHPAVPP SVSMVERVHH PAVPQLLKQA RHHSQPSLVV RVGGEVPAVL RSDSMRERDR
201: RFDQFKTFSG RLERQLSSLR GVPQNTDVEK GAASKISEED TDEDDEVPTA DRYFAALEGP ELETLRSTEV AVLPKDETWP FLLRFPISAF GMCLGVSSQA
301: MLWKTLESEP STKFLHVHPA TNHVLWWISV ALMVVVSITY LLKVVFYFEA VRREFHHPVR VNFFFAPWIA CLFLVKGVPH PVWEIHHAVW YLLMAPILCL
401: DLKIYGQWMS SGERRLSKVA NPSNHLAIVG NFVGALLGAR MGLRELPIFF FAVGLAHYVV LFVTLYQRLP TNAQLPKELH PVFFLFVAAP SVASMAWTRI
501: CGEFNDGSKL LYFVSLFLYV SLVVRINIFR GFKFSLAWWA YTFPMTSVAL ATVLYASEVD NMLTRALAVG LSGIAVVTVT GVLATTMYHA FVRKDLFPND
601: VSIAITRRRP KFSKILAHLR SSSSDVKELI LSIPNFSSNS KQGACCDDAG SSYKTSGSVG ESPVAHEHGR AKC

Best Arabidopsis Sequence Match ( AT4G27970.6 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.