Factsheet for TraesCSU01G001600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G433200.1	Wheat	plasma membrane	96.89	95.79
TraesCS1B01G456300.1	Wheat	plasma membrane	93.28	91.92
TraesCSU01G204200.1	Wheat	plasma membrane	37.21	85.98
TraesCSU01G001400.1	Wheat	plasma membrane, plastid	86.23	83.76
TraesCSU01G001500.1	Wheat	plasma membrane	89.34	80.98
HORVU1Hr1G092640.3	Barley	mitochondrion	86.89	80.55
Zm00001d009705_P001	Maize	plasma membrane	65.9	70.4
Zm00001d009706_P001	Maize	cytosol, peroxisome, plasma membrane	58.03	68.21
Zm00001d039150_P001	Maize	plasma membrane	67.05	67.94
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	57.38	67.83
EES20021	Sorghum	plastid	67.54	66.24
OQU77336	Sorghum	cytosol	55.74	64.64
KXG22628	Sorghum	plastid	66.23	62.93
CDX84361	Canola	plasma membrane	38.52	60.26
GSMUA_Achr9P05400_001	Banana	plastid	43.44	59.42
Bra040840.1-P	Field mustard	plastid	44.92	55.13
CDY29871	Canola	plastid	44.92	55.13
CDX92855	Canola	plastid	44.92	55.02
KRH38307	Soybean	golgi, plasma membrane, plastid	36.72	54.11
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	43.77	53.19
AT4G27970.6	Thale cress	plastid	45.08	52.99
GSMUA_Achr4P15620_001	Banana	cytosol, peroxisome, plasma membrane	43.93	52.65
GSMUA_Achr6P31880_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	50.98	52.01
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	46.39	50.99
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	47.7	49.91
KRH08776	Soybean	cytosol, nucleus, plasma membrane	48.69	49.75
KRH38311	Soybean	cytosol, nucleus, plasma membrane	48.36	49.41
Bra026471.1-P	Field mustard	cytosol, plastid	44.75	49.01
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	50.0	48.64
KRH08775	Soybean	cytosol, nucleus, plasma membrane	46.07	48.12
PGSC0003DMT400074359	Potato	plasma membrane	47.05	47.99
Solyc09g014610.2.1	Tomato	plasma membrane	46.56	47.81
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	48.2	47.73
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.03	47.49
KRH35219	Soybean	cytosol	43.11	46.88
CDX87147	Canola	cytosol, nucleus, plasma membrane	45.74	44.78
CDX80404	Canola	cytosol	45.74	43.87
Bra009724.1-P	Field mustard	cytosol	45.74	43.87
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	45.25	43.46
Bra029390.1-P	Field mustard	cytosol	45.57	43.44
CDY19015	Canola	plastid	44.92	43.01
Bra026294.1-P	Field mustard	plastid	44.75	42.79
CDX89215	Canola	plastid	44.59	42.7
CDY44267	Canola	cytosol	42.79	42.51
Bra010388.1-P	Field mustard	plastid	44.75	42.13
CDY46973	Canola	cytosol	42.62	42.07
CDY14262	Canola	plastid	44.59	41.98
CDX88065	Canola	cytosol	45.9	37.58

Protein Annotations

EnsemblPlants:TraesCSU01G001600.1	EnsemblPlantsGene:TraesCSU01G001600	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
PANTHER:PTHR31269	PANTHER:PTHR31269:SF6	PFAM:PF03595	SEG:seg	TIGR:cd09323	TMHMM:TMhelix
MapMan:24.3.10	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:1943981..1947489

Molecular Weight (calculated)

67463.8 Da

IEP (calculated)

9.403

GRAVY (calculated)

0.144

Length

610 amino acids

Sequence
(BLAST)

001: MASREVRVQM AGVLDGKPRC APSPETLLVR VPSRATGGAA VASHADTPCS VSFSVPGSPS GLHLAQLGMP PCVRGNGADV GATRVPLSES KVELVHHPAV
101: PQLLKQARHH SQPSLVVRVG GEVPTVLRSD STRERDRRFD HFKTFSGRLE RQLSSLRGVP QDIDVEQGAA SKISEEDTDE DDEVPTADRY FAALEGPELE
201: TLRSTEVAVL PKDETWPFLL RFPISAFGMC LGVSSQAMLW KTLQTEPSTK FLHVHPVVNH VLWWVSVALM GVVSITYLLK IVFYFEAVRR EFHHPVRVNF
301: FFAPWIACLF LVKGLPHPVW EIHHAVWYVL MAPILCLDLK IYGQWMSSGE RRLSKVANPS NHLAVVGNFV GALLGARMGL RELPIFFFAV GLAHYVVLFV
401: TLYQRLPTNV QLPKELHPVF FLFVAAPSVA SMAWTRISGE FNNGAKLLYF VSLFLYVSLV VRVNLFRGFR FSLSWWAYTF PMTSVALATV LYASEVDNML
501: TRALAVGLSG IAVVTVTSVL ATTMYHTFVR KDLFPNDVSI AITRRRPKFS KILAHLRSSS SDVKELVLSI PNFSSNSKQG AYSDDAGSNS RMSGSVGESP
601: VAHGHRRTEC

Best Arabidopsis Sequence Match ( AT4G27970.5 )
(BLAST)

001: MCLGVSSQAI MWKTLATTEA EKFLHVTQVI NHVLWWISLL LLLAVSITYL FKTILFFEAV RREFRHPIRV NFFFAPLISI LFLALGIPHS IISHLPSTLW
101: YFLMAPILFL EMKIYGQWMS GGQRRLSKVA NPTNHLSIVG NFAGALLGAS MGLKEGPIFF FAIGLAYYLV LFVTLYQRLP TNETLPKELH PVFFLFVAAP
201: AVASMAWTKI SASFDLGSRL AYFISLFLYF SLVCRINLFR GFKFSLAWWA YTFPMTAVAS ATIKYSDEVT GVATKILSVV MSGAATLTVI AVLGLTVMHA
301: FVQRDLFPND VVIAISAEQP KQKRWFKHLT KESYGNNERC PKILDPEDNQ IDLESPPLVN VDSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.