CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039314_P001	Maize	plasma membrane	66.5	71.89
TraesCS3D01G159600.1	Wheat	cytosol, peroxisome, plasma membrane	54.12	71.81
TraesCS3B01G178600.1	Wheat	cytosol, peroxisome, plasma membrane	53.88	71.59
TraesCS3A01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	53.62	70.79
HORVU3Hr1G030850.3	Barley	cytosol	28.75	67.65
Os01t0226600-02	Rice	endoplasmic reticulum, peroxisome, plasma membrane	54.38	66.31
GSMUA_Achr5P06840_001	Banana	cytosol, endoplasmic reticulum, peroxisome	33.0	65.67
CDX84361	Canola	plasma membrane	29.0	59.49
OQU77636	Sorghum	cytosol, peroxisome, plasma membrane	46.25	58.92
KRH38307	Soybean	golgi, plasma membrane, plastid	29.0	56.04
KXG28459	Sorghum	cytosol, peroxisome, plasma membrane	36.5	55.51
KXG24404	Sorghum	cytosol, peroxisome, plasma membrane	44.12	54.81
Bra040840.1-P	Field mustard	plastid	32.75	52.72
CDY29871	Canola	plastid	32.75	52.72
PGSC0003DMT400021864	Potato	cytosol, peroxisome, plastid	36.5	52.61
CDX92855	Canola	plastid	32.75	52.61
CDX97408	Canola	cytosol, peroxisome, plasma membrane, plastid	33.0	52.59
Solyc03g007770.2.1	Tomato	cytosol, nucleus, plasma membrane	38.0	52.14
KRH38311	Soybean	cytosol, nucleus, plasma membrane	38.5	51.59
KRH08776	Soybean	cytosol, nucleus, plasma membrane	38.5	51.59
Bra026471.1-P	Field mustard	cytosol, plastid	35.88	51.53
PGSC0003DMT400074359	Potato	plasma membrane	38.38	51.34
KXG22629	Sorghum	cytosol, peroxisome, plasma membrane	32.75	50.78
GSMUA_Achr7P14260_001	Banana	cytosol	37.62	50.5
VIT_16s0050g01860.t01	Wine grape	cytosol, nucleus, plasma membrane	39.5	50.4
AT4G27970.6	Thale cress	plastid	32.62	50.29
PGSC0003DMT400051388	Potato	cytosol, nucleus, plasma membrane	38.5	50.0
Solyc06g036440.1.1	Tomato	cytosol, peroxisome, plasma membrane	38.5	49.92
Solyc09g014610.2.1	Tomato	plasma membrane	36.88	49.66
KRH08775	Soybean	cytosol, nucleus, plasma membrane	35.88	49.14
KRH35219	Soybean	cytosol	33.38	47.59
CDX87147	Canola	cytosol, nucleus, plasma membrane	37.0	47.51
HORVU3Hr1G030840.1	Barley	cytosol	30.0	47.15
AT5G24030.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	37.12	46.77
CDX80404	Canola	cytosol	36.75	46.23
OQU77336	Sorghum	cytosol	30.38	46.2
Bra009724.1-P	Field mustard	cytosol	36.62	46.07
Bra029390.1-P	Field mustard	cytosol	36.5	45.62
CDY44267	Canola	cytosol	34.25	44.63
EES20021	Sorghum	plastid	34.5	44.37
CDY46973	Canola	cytosol	34.0	44.01
KXG22628	Sorghum	plastid	34.0	42.37
CDY19015	Canola	plastid	32.62	40.97
Bra026294.1-P	Field mustard	plastid	32.5	40.75
CDX89215	Canola	plastid	32.38	40.66
CDY14262	Canola	plastid	32.88	40.59
Bra010388.1-P	Field mustard	plastid	32.75	40.43
OQU87187	Sorghum	plasma membrane	39.75	39.5
CDX88065	Canola	cytosol	36.75	39.46
OQU82188	Sorghum	plastid	29.0	35.53
EER99979	Sorghum	plastid	18.12	34.52

Protein Annotations

EnsemblPlants:KXG31512	EnsemblPlantsGene:SORBI_3003G010800	Gene3D:1.50.10.150	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR038665	InterPro:Voltage-dep_anion_channel	InterPro:Voltage-dep_anion_channel_sf
ncoils:Coil	PANTHER:PTHR31269	PANTHER:PTHR31269:SF5	PFAM:PF03595	ProteinID:KXG31512	ProteinID:KXG31512.2
SEG:seg	TMHMM:TMhelix	UniParc:UPI0009DC871F	UniProt:A0A1B6Q0R8	MapMan:24.3.10	:

Description

hypothetical protein

Coordinates

chr3:-:948001..951283

Molecular Weight (calculated)

87392.2 Da

IEP (calculated)

9.003

GRAVY (calculated)

0.172

Length

800 amino acids

Sequence
(BLAST)

001: MTLVLSTSPV IAQTQRHCRM QYLSACLPVC SLPPAQQLLA ELDARSPQVA CSPGNVPCHL CQTIAILADR KLRATSLEIC RGRPCTAAPA PHIWTVPDAL
101: AFILLPPSSY LSLQSAPCFP PTPIYTRVCA FTRPQHKLQV ALTMARCSTC ARFSRFMETD EFAVPPRPAL VHPDAVGVRI PSSVFSPDQE PPPVFREGES
201: RHGGDMAASP GYSPFLPSAP HIGRPVSISL PASPTGGFDI SSRMEAELQR EPDAAAAAVT DAPPRMMLPP RAPEGVALAQ PTKMVFRSQP IPAAPAEVDG
301: AAMGHDDFGR SASAPYAAAT APPAKVRRDS RDTSYDSFKT WSGKLEKQIT THLLGSSRLP PAQQQPQQGE ETAEEDDAAA NERRNSSVPR VQRFFAALEG
401: PELDKLRSSE ELILPSDKTW PFLLRFPVSA FGMCMGMSSQ AILWKRIAIS ASTRFLHITV KINLVLWCVS VALMLAVSAL YASKVVFYFE AVRREYYHPI
501: RVNFFFAPWI ACLFLAIGVP DLVAATLPHW LWYVLMAPIV CLELKIYGQW ISGGQRRLSR VANPSNHLSI VGNFVGALLG GIMGLKEGPM FFFSVGLAHY
601: IVLFVTLYQR LPTSETLPRD LHPVFFLFVA APSVACLAWA RITGAFGYGS RVAYFIAMFL YASLAVRINL FRGFSFSLAW WAYTFPMTSA AIASIRYSSE
701: VKNAFTQCMC IGLSAAATLA VAALFLTTLL HAVVYRDLFP NDISIAITER RRSKPLVGEK MLLRLRSAVG TKKLQQALST AQSDAADLEA ARAATTTSYT

Best Arabidopsis Sequence Match ( AT4G27970.1 )
(BLAST)

001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVCRINLFRG FKFSLAWWAY
401: TFPMTAVASA TIKYSDEVTG VATKILSVVM SGAATLTVIA VLGLTVMHAF VQRDLFPNDV VIAISAEQPK QKRWFKHLTK ESYGNNERCP KILDPEDNQI
501: DLESPPLVNV DSSTVQNSN

Arabidopsis Description

SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.