Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P06840_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 55.65 | 15.92 |
| GSMUA_Achr4P15620_001 | Banana | cytosol, peroxisome, plasma membrane | 57.39 | 12.97 |
| GSMUA_Achr6P31880_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 60.0 | 11.54 |
| GSMUA_Achr9P05400_001 | Banana | plastid | 43.48 | 11.21 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 40.87 | 8.7 |
| GSMUA_Achr8P12070_001 | Banana | cytosol | 37.39 | 8.62 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus, plastid | 43.48 | 8.58 |
| GSMUA_Achr5P20180_001 | Banana | cytosol | 40.87 | 8.27 |
| GSMUA_Achr7P14260_001 | Banana | cytosol | 40.87 | 7.89 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 11.3 | 3.6 |
| GSMUA_Achr7P17640_001 | Banana | golgi, plasma membrane, plastid | 11.3 | 3.39 |
| GSMUA_Achr6P07610_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 9.57 | 3.25 |
| GSMUA_Achr1P25300_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 10.43 | 3.15 |
| GSMUA_Achr9P21990_001 | Banana | plasma membrane | 8.7 | 2.65 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P06370_001 | EnsemblPlants:GSMUA_Achr2T06370_001 | EnsemblPlantsGene:GSMUA_Achr2G06370_001 | PANTHER:PTHR31269 | PANTHER:PTHR31269:SF12 | SEG:seg |
| UniParc:UPI000295E91A | UniProt:M0S5M8 | MapMan:35.1 | : | : | : |
Description
C4-dicarboxylate transporter/malic acid transport protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G06370_001]
Coordinates
chr2:-:11183201..11183722
Molecular Weight (calculated)
12973.0 Da
IEP (calculated)
4.588
GRAVY (calculated)
-0.784
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGDNQRDG RFDSFKAWSG RLERRSSYLR GRPQEPEVEA SDSDIVKDEP VPAADRYFDA LQGPELDTLR ASVLPEDETW PFLLRFPISQ EGSLPSPPSL
101: PRLSKFMATL RSSQT
101: PRLSKFMATL RSSQT
001: MNNPRSVSPL VSPANHSDLL ENQRQSGSGD FSRLEKRIGA RKMKFHSKSM PRGAMFLDQE ASRNFHDKRY DLFRTMSGKL ERQISNLRGK PTESSLQDHK
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVVFVFINRV LVS
101: EITESLTADR YFDALQGPEL ETLKEKEKIV LPEDKTWPFL LRFPITSYGM CLGVSSQAIM WKTLATTEAE KFLHVTQVIN HVLWWISLLL LLAVSITYLF
201: KTILFFEAVR REFRHPIRVN FFFAPLISIL FLALGIPHSI ISHLPSTLWY FLMAPILFLE MKIYGQWMSG GQRRLSKVAN PTNHLSIVGN FAGALLGASM
301: GLKEGPIFFF AIGLAYYLVL FVTLYQRLPT NETLPKELHP VFFLFVAAPA VASMAWTKIS ASFDLGSRLA YFISLFLYFS LVVFVFINRV LVS
Arabidopsis Description
SLAH2S-type anion channel SLAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.