Factsheet for TraesCS5D01G434800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G127500.1
TraesCS1A01G423000.1
TraesCS1A01G423900.1
TraesCS1A01G424400.1
TraesCS1A01G424500.1
TraesCS1B01G147400.1
TraesCS1B01G388600.1
TraesCS1B01G455100.1
TraesCS1B01G456000.1
TraesCS1B01G456100.1
TraesCS1B01G456200.1
TraesCS1B01G456300.1
TraesCS1B01G456400.1
TraesCS1B01G456500.1
TraesCS1D01G126500.1
TraesCS1D01G432500.1
TraesCS1D01G432700.1
TraesCS1D01G432800.1
TraesCS1D01G432900.1
TraesCS1D01G433100.1
TraesCS1D01G433200.1
TraesCS3A01G028100.1
TraesCS3A01G151400.1
TraesCS3A01G225100.1
TraesCS3B01G018300.1
TraesCS3B01G178600.1
TraesCS3B01G254700.1
TraesCS3D01G017800.1
TraesCS3D01G159600.1
TraesCS3D01G228400.1
TraesCSU01G001400.1
TraesCSU01G001500.1
TraesCSU01G001600.1
TraesCSU01G204200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	TraesCS1A01G127500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G423000.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G423900.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G424400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1A01G424500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G147400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G388600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G455100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456000.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456200.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456300.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1B01G456500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G126500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432700.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432800.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G432900.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G433100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS1D01G433200.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G028100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G151400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3A01G225100.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G018300.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G178600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3B01G254700.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G017800.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G159600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCS3D01G228400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001400.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001500.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G001600.1	AT5G24030.1	24280384
AT2G38910.1	TraesCSU01G204200.1	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G428700.1	Wheat	cytosol	94.75	98.63
TraesCS5A01G426800.2	Wheat	cytosol	98.03	98.03
Zm00001d034376_P001	Maize	plastid	81.64	85.86
EER90764	Sorghum	plastid	81.97	85.47
Zm00001d013105_P004	Maize	cytosol, plastid	80.66	84.25
TraesCS2D01G249900.2	Wheat	cytosol, plastid	71.8	77.94
GSMUA_Achr9P25890_001	Banana	plastid	59.02	75.31
Os03t0789000-00	Rice	cytosol, plasma membrane	70.33	72.84
VIT_08s0032g00780.t01	Wine grape	cytosol	65.74	70.6
PGSC0003DMT400018575	Potato	cytosol	61.31	68.75
Solyc10g076900.1.1	Tomato	cytosol	55.74	67.86
CDY07688	Canola	cytosol	60.82	67.45
CDY14419	Canola	cytosol	60.82	67.45
TraesCS4D01G107200.1	Wheat	plastid	56.72	67.32
Bra000105.1-P	Field mustard	cytosol	62.46	67.31
AT2G38910.1	Thale cress	cytosol, plastid	63.93	66.9
PGSC0003DMT400054991	Potato	cytosol	63.44	66.49
TraesCS5D01G122800.1	Wheat	cytosol	57.54	66.35
Solyc01g006730.2.1	Tomato	cytosol	63.11	66.15
Solyc10g081640.1.1	Tomato	cytosol	62.62	65.98
KRH32931	Soybean	plastid	63.77	65.38
TraesCS1D01G433400.1	Wheat	cytosol, golgi	48.52	64.35
TraesCS6D01G242000.2	Wheat	mitochondrion	57.21	63.69
TraesCS5D01G124000.1	Wheat	plastid	64.92	63.46
TraesCS5D01G434500.2	Wheat	cytosol	64.75	63.3
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	57.38	62.95
TraesCS6D01G404800.1	Wheat	cytosol	55.25	60.07
PGSC0003DMT400072292	Potato	cytosol, plastid	62.62	59.87
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	48.85	57.53
TraesCS3D01G327700.3	Wheat	plastid	48.52	56.92
TraesCS1D01G308800.1	Wheat	plastid	47.87	56.48
TraesCS4D01G318400.2	Wheat	cytosol	49.84	55.47
TraesCS4D01G125500.1	Wheat	cytosol	48.36	55.45
TraesCS2D01G229100.2	Wheat	cytosol	47.87	53.97
TraesCS5D01G153800.1	Wheat	cytosol	47.54	53.6
TraesCS2D01G404200.1	Wheat	cytosol	46.89	53.56

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13405	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF183	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5D01G434800	EnsemblPlants:TraesCS5D01G434800.2	TIGR:cd00051	TIGR:cd05117	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:490032021..490035598

Molecular Weight (calculated)

67119.4 Da

IEP (calculated)

5.546

GRAVY (calculated)

-0.290

Length

610 amino acids

Sequence
(BLAST)

001: MGNSCVGAGP NGAGRSGFLA SVAIWRAKPA EQAPATDTPP ASTSEQKAPE PVTIPPGEHS SSHGGARPSD PPPPKRAETQ RQMSMAPTAK KPVPKVKRVQ
101: SAGLQADSVL KRDVNTAKLK DLYTIGKKLG QGQFGTTYLC VEKATGKEYA CKSIAKRKLL TDEDVEDVRR EIQIMHHLAG HSSVVSIVGA YEDAVAVQLV
201: MELCAGGELF DRIIQRGHYS EKAAAQLTRV IVGVIEACHS LGVMHRDLKP ENFLFINTQE DSPLKAIDFG LSIFFTPGQM FTDVVGSPYY VAPEVLLKNY
301: GREVDVWSAG VIIYILLSGV PPFWDESEQG IFEQVLKGEL DFTTDPWPSI SESAKDLVRK MLNRDPRKRL TAHEALCHPW VCVDGVAPDK PLDSAVLSRL
401: KQFSAMNKLK KMALRVIAES LSEEEIAGLK EMFKMLDTDN SGHITLEELK TGLRRVGATL MDSEIDALME AADIDNSGTI DYGEFIAATM HMNKVEKDDK
501: LFAAFQYFDK DGSGYITQDE LQKACEEFGI GDTRIEDIIG DVDKDNVSRF IVQVLNCQQQ FCLIVHHLLQ DGKIDYNEFV EMMQKGNNPL GRKGQQSNVN
601: FGLGDALKLR

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.