Factsheet for Zm00001d013105_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d009705_P001
Zm00001d009706_P001
Zm00001d010430_P001
Zm00001d011393_P001
Zm00001d037816_P001
Zm00001d039150_P001
Zm00001d039314_P001
Zm00001d041653_P001
Zm00001d044181_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	Zm00001d009705_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d009706_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d010430_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d011393_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d037816_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d039150_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d039314_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d041653_P001	AT5G24030.1	24280384
AT2G38910.1	Zm00001d044181_P001	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034376_P001	Maize	plastid	95.89	96.55
EER90764	Sorghum	plastid	95.38	95.21
TraesCS5B01G428700.1	Wheat	cytosol	84.25	83.96
TraesCS5A01G426800.2	Wheat	cytosol	84.42	80.82
TraesCS5D01G434800.2	Wheat	cytosol	84.25	80.66
GSMUA_Achr9P25890_001	Banana	plastid	63.7	77.82
Zm00001d007912_P009	Maize	cytosol, plastid	78.25	76.55
Os03t0789000-00	Rice	cytosol, plasma membrane	75.17	74.53
VIT_08s0032g00780.t01	Wine grape	cytosol	70.38	72.36
PGSC0003DMT400018575	Potato	cytosol	66.27	71.14
Solyc10g076900.1.1	Tomato	cytosol	59.76	69.66
Zm00001d053016_P002	Maize	cytosol, plastid	59.42	68.31
Zm00001d004812_P002	Maize	plastid	59.59	68.24
Solyc01g006730.2.1	Tomato	cytosol	67.98	68.21
Bra000105.1-P	Field mustard	cytosol	66.1	68.2
CDY14419	Canola	cytosol	64.21	68.18
CDY07688	Canola	cytosol	64.21	68.18
AT2G38910.1	Thale cress	cytosol, plastid	67.98	68.1
PGSC0003DMT400054991	Potato	cytosol	67.29	67.53
Zm00001d034372_P001	Maize	cytosol	70.72	67.48
Solyc10g081640.1.1	Tomato	cytosol	66.44	67.01
Zm00001d040996_P003	Maize	plastid	69.18	66.34
KRH32931	Soybean	plastid	67.29	66.05
Zm00001d002540_P002	Maize	cytosol, mitochondrion	60.27	64.35
Zm00001d013109_P002	Maize	plasma membrane	67.81	63.87
Zm00001d023560_P002	Maize	cytosol	42.47	63.59
Zm00001d026018_P001	Maize	mitochondrion	60.1	63.13
Zm00001d051502_P004	Maize	mitochondrion	60.1	62.46
PGSC0003DMT400072292	Potato	cytosol, plastid	66.44	60.81
Zm00001d027480_P002	Maize	cytosol	54.97	59.01
Zm00001d044185_P005	Maize	cytosol, mitochondrion	52.23	58.21
Zm00001d011392_P001	Maize	cytosol, plastid	52.23	57.55
Zm00001d009708_P001	Maize	mitochondrion	52.91	57.33
Zm00001d012552_P005	Maize	plastid	50.86	57.12
Zm00001d010659_P001	Maize	plastid	50.51	56.73
Zm00001d043150_P002	Maize	plastid	50.34	56.54
Zm00001d021623_P001	Maize	plasma membrane	50.17	55.18
Zm00001d006479_P005	Maize	plasma membrane	50.17	55.18
Zm00001d052438_P001	Maize	cytosol, plastid	50.51	53.73
Zm00001d004998_P001	Maize	cytosol	50.68	53.62
Zm00001d029758_P004	Maize	cytosol	46.75	50.56
Zm00001d026139_P001	Maize	cytosol	45.38	44.69

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:103625819	MapMan:18.4.5.4	Gene3D:3.30.200.20	UniProt:A0A1D6GFX7
ProteinID:AQK62457.1	ProteinID:AQK62460.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF183	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002220E19	EnsemblPlantsGene:Zm00001d013105
EnsemblPlants:Zm00001d013105_P004	EnsemblPlants:Zm00001d013105_T004	SEG:seg	:	:	:

Description

Calcium-dependent protein kinase 20

Coordinates

chr5:+:4762656..4766640

Molecular Weight (calculated)

64117.4 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.301

Length

584 amino acids

Sequence
(BLAST)

001: MGNTCVGPSA AGRNGFLANV TLWRPRGDDP TPAPALPPPS SPASDKAPDP VTIPESKPSS HHSSRSTDLP PAPASQPQAQ AQDNTPAKQP APKVKRVQSA
101: GLLADSVLKR DVNTARLKDL YTIGKKLGQG QFGTTYLCVE KATGREFACK SIAKRKLITE EDVEDVRREI QIMHHLAGHA NVVSIVGAYE DAVAVQLVME
201: LCAGGELFDR IIKRGHYSEK AAAQLARVIV GVVESCHSLG VMHRDLKPEN FLFVNQKEDS PLMTIDFGLS IFFKPGEMFT DVVGSPYYVA PEVLLKYYGR
301: EVDVWSAGVI IYILLSGVPP FWDESEQGIF EQVLRGDLDF SSEPWPSISE SAKDLVRKML IRDPKKRLTA HEALCHPWVC VDGVAPDKPL DSAVLSRLKQ
401: FSAMNKLKKM ALRVIAESLS EEEIAGLKEM FKMIDTDNSG HITLEELKTG LQRVGANLMD SEINALMEAA DIDNSGTIDY GEFIAATLHI NKVEKEDKLF
501: AAFSYFDKDG SGYITQDELQ KACEEFGIGD TRLEDIIGDI DQDNDGRIDY NEFVAMMQKG DNPLGRKGYQ SNGNFGLGDA LKLR

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.