Factsheet for Solyc01g006730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g007770.2.1
Solyc06g036440.1.1
Solyc09g014610.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38910.1	Solyc03g007770.2.1	AT5G24030.1	24280384
AT2G38910.1	Solyc06g036440.1.1	AT5G24030.1	24280384
AT2G38910.1	Solyc09g014610.2.1	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054991	Potato	cytosol	97.08	97.08
Solyc10g081640.1.1	Tomato	cytosol	81.79	82.21
Solyc10g076900.1.1	Tomato	cytosol	70.62	82.04
VIT_08s0032g00780.t01	Wine grape	cytosol	75.77	77.64
CDY07688	Canola	cytosol	69.93	74.0
CDY14419	Canola	cytosol	69.93	74.0
Bra000105.1-P	Field mustard	cytosol	71.82	73.85
GSMUA_Achr9P25890_001	Banana	plastid	59.79	72.8
KRH32931	Soybean	plastid	74.06	72.44
AT2G38910.1	Thale cress	cytosol, plastid	72.51	72.38
Solyc10g081740.1.1	Tomato	cytosol	59.62	69.54
Solyc04g009800.2.1	Tomato	cytosol, plastid	68.9	69.02
Zm00001d034376_P001	Maize	plastid	68.56	68.79
TraesCS2D01G249900.2	Wheat	cytosol, plastid	66.15	68.51
HORVU2Hr1G058530.2	Barley	cytosol, plastid	66.32	68.32
Os07t0161600-01	Rice	plasma membrane	66.67	68.31
EER90764	Sorghum	plastid	68.56	68.21
TraesCS2B01G269200.3	Wheat	cytosol, plastid	66.15	68.02
TraesCS2A01G248200.3	Wheat	cytosol, plastid	66.15	68.02
Solyc11g006370.1.1	Tomato	plastid	67.53	67.99
Zm00001d013105_P004	Maize	cytosol, plastid	68.21	67.98
EER98014	Sorghum	cytosol, plastid	65.98	66.09
TraesCS5B01G428700.1	Wheat	cytosol	66.15	65.7
Zm00001d007912_P009	Maize	cytosol, plastid	66.67	64.99
Solyc01g112250.2.1	Tomato	cytosol	58.76	64.04
Solyc05g056570.2.1	Tomato	cytosol	54.81	63.42
Solyc04g049160.2.1	Tomato	cytosol	55.33	63.39
TraesCS5D01G434800.2	Wheat	cytosol	66.15	63.11
TraesCS5A01G426800.2	Wheat	cytosol	66.15	63.11
Os03t0789000-00	Rice	cytosol, plasma membrane	63.75	62.99
Solyc01g006840.2.1	Tomato	cytosol	64.43	62.71
Solyc11g018610.1.1	Tomato	cytosol	54.3	62.57
Solyc06g065380.2.1	Tomato	cytosol, plastid	54.12	62.13
Solyc10g074570.1.1	Tomato	cytosol, plastid	59.11	61.76
Solyc08g008170.2.1	Tomato	plastid	50.69	57.17
Solyc11g064900.1.1	Tomato	cytosol	51.03	56.14
Solyc12g099790.1.1	Tomato	cytosol	50.17	54.58
Solyc04g081910.2.1	Tomato	cytosol, plastid	48.8	54.51
Solyc01g008740.1.1	Tomato	cytosol	50.52	54.34
Solyc02g032820.2.1	Tomato	cytosol, plastid	39.86	54.08
Solyc07g064610.2.1	Tomato	nucleus	47.77	53.36
Solyc03g031670.2.1	Tomato	cytosol	48.63	51.18
Solyc12g005040.1.1	Tomato	cytosol	8.08	45.63

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004683
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	UniProt:K4ASN9	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF81	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g006730.2	EnsemblPlants:Solyc01g006730.2.1
UniParc:UPI00027624CA	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:1328459..1332580

Molecular Weight (calculated)

64620.0 Da

IEP (calculated)

6.027

GRAVY (calculated)

-0.407

Length

582 amino acids

Sequence
(BLAST)

001: MGNTCIGPKL GNNGFLQSVT AAVWKTRQQQ HLPLANKGDS NSHKTQEHSS VGSSLNVDGN DANRFGGTQS TPPPHLKISG NDTNEKNSSP NVSNKPVEGV
101: KQNKPSHVKR VSSIGLKIDS VLGRKTGNLK EIYSLGRKLG QGQFGTTYLC VDKVHGREMA CKSIAKRKLN TEEDVEDVRR EIQIMHHLAG HPSVVQIVGA
201: YEDAVEVHVV MELCAGGELF DRILQRGHYS EKKAAELARV IVGVVEACHS MGVMHRDLKP ENFLFINQDE DSHLKTIDFG LSVFFKPGEI FTDVVGSPYY
301: VAPEVLRKHY GSECDIWSAG VIIYILLSGV PPFWEETEQG IFEQVLRGEL DFVSEPWPSI SESAKDLVRK MLVRDPKKRL TAHEVLCHPW VRVGGVAPDK
401: PLDSAVLTRL NQFSAMNKLK KIAVRVIAES LSAEEIAGLK EMFKMIDTDN SGNITLEELK KGLERVGADL KDSEITSLMQ AADTDNSGTI DYGEFIAAML
501: HLNKIQKEDH MYAAFSYFDQ DGSGYITKDE LQQACEKFGM SNIPIEELMR EVDQDNDGRI DYNEFVAMMQ DTGLGELGSR RR

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.