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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 3
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc03g007770.2.1
Solyc06g036440.1.1
Solyc09g014610.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G10660.1 Solyc03g007770.2.1 AT5G24030.1 24280384
AT3G10660.1 Solyc06g036440.1.1 AT5G24030.1 24280384
AT3G10660.1 Solyc09g014610.2.1 AT5G24030.1 24280384
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065419 Potato plastid 98.45 98.45
Solyc11g006370.1.1 Tomato plastid 86.23 86.68
VIT_13s0175g00080.t01 Wine grape cytosol, plastid 82.1 83.83
KRG90147 Soybean cytosol, plastid 80.38 80.66
KRH33395 Soybean endoplasmic reticulum, nucleus 80.38 80.38
CDX70192 Canola cytosol, plastid 79.0 80.24
CDX98791 Canola cytosol, plastid 78.83 79.93
CDX80925 Canola cytosol 78.66 79.76
CDY11313 Canola cytosol 79.69 78.74
GSMUA_Achr7P07810_001 Banana cytosol, plastid 67.99 78.53
Bra009420.1-P Field mustard cytosol, plastid 79.86 78.51
AT5G04870.1 Thale cress cytosol, plastid 81.07 77.21
CDY08584 Canola cytosol 76.42 77.08
Bra005824.1-P Field mustard cytosol, plastid 80.03 76.73
CDY00963 Canola plastid 75.04 75.96
GSMUA_AchrUn_... Banana cytosol 72.98 75.44
CDX73914 Canola plastid 77.28 74.96
Solyc10g081740.1.1 Tomato cytosol 64.2 74.75
CDY00688 Canola plastid 76.94 74.5
Os03t0788500-01 Rice cytosol 74.87 72.62
EER93328 Sorghum cytosol 75.22 70.83
Zm00001d034372_P001 Maize cytosol 74.53 70.75
AT3G10660.1 Thale cress cytosol, plastid 78.14 70.28
Solyc10g076900.1.1 Tomato cytosol 60.41 70.06
TraesCS5D01G434500.2 Wheat cytosol 74.7 69.55
TraesCS5A01G426500.1 Wheat cytosol 74.53 69.06
TraesCS5B01G428400.2 Wheat cytosol 74.53 69.06
Solyc01g006730.2.1 Tomato cytosol 69.02 68.9
Zm00001d013109_P002 Maize plasma membrane 73.49 68.87
Solyc01g006840.2.1 Tomato cytosol 70.57 68.56
Zm00001d040996_P003 Maize plastid 71.77 68.47
Solyc10g081640.1.1 Tomato cytosol 67.47 67.7
KXG23457 Sorghum plastid 71.6 67.53
Solyc01g112250.2.1 Tomato cytosol 61.79 67.23
GSMUA_Achr4P22740_001 Banana cytosol, plastid 74.01 66.77
Solyc04g049160.2.1 Tomato cytosol 57.83 66.14
TraesCS5B01G109300.1 Wheat plastid 70.91 66.03
TraesCS5D01G124000.1 Wheat plastid 70.74 65.87
Solyc05g056570.2.1 Tomato cytosol 56.8 65.61
Solyc06g065380.2.1 Tomato cytosol, plastid 56.8 65.09
Solyc11g018610.1.1 Tomato cytosol 56.45 64.95
Solyc10g074570.1.1 Tomato cytosol, plastid 62.13 64.81
GSMUA_Achr7P01360_001 Banana cytosol 72.63 62.89
HORVU5Hr1G030810.1 Barley cytosol 70.74 59.65
Solyc08g008170.2.1 Tomato plastid 51.98 58.53
Solyc11g064900.1.1 Tomato cytosol 51.98 57.09
Solyc01g008740.1.1 Tomato cytosol 51.98 55.82
Solyc12g099790.1.1 Tomato cytosol 51.12 55.51
Solyc07g064610.2.1 Tomato nucleus 49.23 54.89
Solyc04g081910.2.1 Tomato cytosol, plastid 49.23 54.89
Solyc12g005040.1.1 Tomato cytosol 9.64 54.37
Solyc02g032820.2.1 Tomato cytosol, plastid 39.76 53.85
Solyc03g031670.2.1 Tomato cytosol 50.09 52.62
Os12t0486600-00 Rice plasma membrane 69.02 52.01
Bra001373.1-P Field mustard plastid 78.49 47.01
Bra029859.1-P Field mustard plastid 76.76 46.95
CDY00964 Canola plastid 0.52 0.9
CDY00689 Canola plastid 0.34 0.6
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20EMBL:AB530160UniProt:E1CFU1
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777InterPro:IPR000719
InterPro:IPR002048InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF161InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc04g009800.2EnsemblPlants:Solyc04g009800.2.1UniParc:UPI0001DD388CSEG:seg::
Description
Calcium dependent protein kinase [Source:UniProtKB/TrEMBL;Acc:E1CFU1]
Coordinates
chr4:-:3108503..3114299
Molecular Weight (calculated)
64606.0 Da
IEP (calculated)
5.561
GRAVY (calculated)
-0.407
Length
581 amino acids
Sequence
(BLAST)
001: MGNTCVGPSI SRNRFLQSVS AAMWPARVPD DSGSTTNGGS SRGGTVESGK DPDLVVQNRA PEQMTMPKSE QKEVEPVKKE EEPVKPKKAV EMKRVGSAGL
101: KTDSVLQKKT GNLKEFFSIG KKLGQGQFGT TFKCVEKGTG KEYACKSIAK RKLLTDDDVE DVRREIQIMH HLAGHPNVIS IKGAYEDAVA VHVVMERCAG
201: GELFDRIIQR GHYTERKAAE LTRTIFGVVE ACHSLSVMHR DLKPENFLFV DQKEDSLLKT IDFGLSVFFK PGERFTDVVG SPYYVAPEVL KKRYGPEADV
301: WSAGVIVYIL LSGVPPFWAE NEQGIFEQVL HGDLDFSSDP WPSISEDAKD LVRGMLVRDP KKRLTAHEVL CHRWVQVDGV APDKPLDSAV LSRMKQFSAM
401: NKLKKMALRV IAESLSEEEI AGLKEMFKMI DTDNSGQITF EELKVGLKRV GANLKESEIY DLMQAADVDN SGTIDYGEFI AATLHFNKIE REDHLFAAFS
501: YFDKDGSGYI TADELQQACE EFGIGDVHLE DMIRDADQDN DGRIDYNEFV AMMQKGHPAS GVGKKGLEHS FSTGFRDVLK L
Best Arabidopsis Sequence Match ( AT5G04870.1 )
(BLAST)
001: MGNTCVGPSR NGFLQSVSAA MWRPRDGDDS ASMSNGDIAS EAVSGELRSR LSDEVQNKPP EQVTMPKPGT DVETKDREIR TESKPETLEE ISLESKPETK
101: QETKSETKPE SKPDPPAKPK KPKHMKRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ FGTTFLCVEK TTGKEFACKS IAKRKLLTDE DVEDVRREIQ
201: IMHHLAGHPN VISIKGAYED VVAVHLVMEC CAGGELFDRI IQRGHYTERK AAELTRTIVG VVEACHSLGV MHRDLKPENF LFVSKHEDSL LKTIDFGLSM
301: FFKPDDVFTD VVGSPYYVAP EVLRKRYGPE ADVWSAGVIV YILLSGVPPF WAETEQGIFE QVLHGDLDFS SDPWPSISES AKDLVRKMLV RDPKKRLTAH
401: QVLCHPWVQV DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF NMIDADKSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD
501: VDNSGTIDYK EFIAATLHLN KIEREDHLFA AFTYFDKDGS GYITPDELQQ ACEEFGVEDV RIEELMRDVD QDNDGRIDYN EFVAMMQKGS ITGGPVKMGL
601: EKSFSIALKL
Arabidopsis Description
CPK1CPK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQJ5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.