Factsheet for Bra029859.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009724.1-P
Bra026471.1-P
Bra029390.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	Bra009724.1-P	AT5G24030.1	24280384
AT3G10660.1	Bra026471.1-P	AT5G24030.1	24280384
AT3G10660.1	Bra029390.1-P	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08584	Canola	cytosol	60.21	99.31
CDY00964	Canola	plastid	34.63	98.21
CDY00963	Canola	plastid	58.0	95.99
Bra001373.1-P	Field mustard	plastid	89.26	87.42
AT3G10660.1	Thale cress	cytosol, plastid	59.37	87.31
Bra009420.1-P	Field mustard	cytosol, plastid	52.0	83.59
Bra005824.1-P	Field mustard	cytosol, plastid	52.21	81.85
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	47.37	79.09
Solyc04g009800.2.1	Tomato	cytosol, plastid	46.95	76.76
PGSC0003DMT400002592	Potato	plastid	46.63	76.64
PGSC0003DMT400065419	Potato	plastid	46.84	76.59
KRG90147	Soybean	cytosol, plastid	46.53	76.34
Solyc11g006370.1.1	Tomato	plastid	46.42	76.3
KRH33395	Soybean	endoplasmic reticulum, nucleus	46.32	75.73
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	39.37	74.35
GSMUA_AchrUn_...	Banana	cytosol	43.47	73.49
Os03t0788500-01	Rice	cytosol	43.47	68.95
Bra000105.1-P	Field mustard	cytosol	40.84	68.55
EER93328	Sorghum	cytosol	43.68	67.26
Zm00001d034372_P001	Maize	cytosol	43.05	66.83
Zm00001d040996_P003	Maize	plastid	42.74	66.67
TraesCS5D01G434500.2	Wheat	cytosol	43.37	66.03
KXG23457	Sorghum	plastid	42.74	65.91
Zm00001d013109_P002	Maize	plasma membrane	42.95	65.81
TraesCS5A01G426500.1	Wheat	cytosol	43.37	65.71
TraesCS5B01G428400.2	Wheat	cytosol	43.26	65.55
TraesCS5B01G109300.1	Wheat	plastid	43.05	65.54
TraesCS5D01G124000.1	Wheat	plastid	42.95	65.38
Bra034407.1-P	Field mustard	cytosol	34.11	65.19
Bra009653.1-P	Field mustard	cytosol	36.32	64.01
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	43.16	63.66
Bra029377.1-P	Field mustard	cytosol	28.11	62.68
Bra019282.1-P	Field mustard	cytosol	24.74	62.5
Bra037277.1-P	Field mustard	cytosol	36.21	62.43
HORVU5Hr1G030810.1	Barley	cytosol	45.16	62.26
Bra029376.1-P	Field mustard	cytosol	30.11	61.9
Bra029378.1-P	Field mustard	cytosol	31.47	61.78
GSMUA_Achr7P01360_001	Banana	cytosol	43.26	61.25
Bra020035.1-P	Field mustard	cytosol	32.11	58.99
Bra002231.1-P	Field mustard	cytosol	31.79	58.41
Bra008910.1-P	Field mustard	cytosol	31.68	57.66
Bra006142.1-P	Field mustard	cytosol	31.47	57.17
Bra023367.1-P	Field mustard	cytosol	30.32	56.14
Bra018504.1-P	Field mustard	cytosol	30.53	55.77
Bra013719.1-P	Field mustard	cytosol, plastid	30.63	55.43
Bra015796.1-P	Field mustard	cytosol, plastid	30.53	55.03
Bra001789.1-P	Field mustard	cytosol	30.95	54.24
Bra019281.1-P	Field mustard	plastid	30.32	54.14
Bra019284.1-P	Field mustard	plastid	30.32	54.14
Bra017283.1-P	Field mustard	cytosol	28.95	53.4
Bra029513.1-P	Field mustard	cytosol	25.47	50.31
Os12t0486600-00	Rice	plasma membrane	40.74	50.19
Bra013575.1-P	Field mustard	cytosol	29.89	49.56
Bra021305.1-P	Field mustard	cytosol	26.21	47.34
Bra033557.1-P	Field mustard	endoplasmic reticulum	36.53	38.77
Bra009697.1-P	Field mustard	cytosol	35.05	36.2

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	Gene3D:3.40.50.300	MapMan:7.11.1.1.1.2
InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra029859	EnsemblPlants:Bra029859.1	EnsemblPlants:Bra029859.1-P
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FeS-cluster_ATPase_SufC	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0016787	GO:GO:0016887	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:IPR003439	InterPro:Kinase-like_dom_sf	UniProt:M4EM39	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS00211	PFscan:PS50011
PFscan:PS50222	PFscan:PS50893	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SMART:SM00382	SUPFAM:SSF47473	SUPFAM:SSF52540	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGRFAMs:TIGR01978	UniParc:UPI000254785A	SEG:seg	:	:

Description

AT3G10660 (E=4e-281) CPK2, ATCPK2 | CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase

Coordinates

chrA05:+:21962712..21968406

Molecular Weight (calculated)

105221.0 Da

IEP (calculated)

5.538

GRAVY (calculated)

-0.356

Length

950 amino acids

Sequence
(BLAST)

001: MAGVNLQLRH SVTQLFPSIS SSPPPPQRFQ LGTSPSRVLF CNVRANSAAA PALRTTRRSD IIAASSVGSS TSSDSVVGDR DEVGRIPLLE VKDLRAVIVE
101: SRQEILKGVN LVVYEGEIHA VMGKNGSGKS TFSKVLVGHP DYEVTGGSIV FKGENLLDME PEERSLAGLF MSFQSPVEIP GVSNMDFLNM AFNARKRKLG
201: QPELDPIQFY SHLVSKLEVV NMKTDFLNRN VNEGFSGGER KRNEILQLAV LGAELAILDE IDSGLDVDAL QDVAKAVNGL LTPKNSVLMI THYQRLLDYI
301: KPTLIHIMEN GRIIKTGDKS LAKLLEKEGY KAISGPNLSG NGFLQTVSAA LWKPRIGAEQ ASSSHGNAQQ VPKEAAAEVS KEAVPDQVQN KPPEQVTMPN
401: PSSIPEAETK PKPEPEEAKQ EVVVQVETST KTETKPEPKP EPTKPETKPE TNPETKPDPN KPKHMRRVSS AGLRTESVLQ RKTENFKEFY SLGRKLGQGQ
501: FGTTFLCLEK GTGNEYACKS ISKRKLLTDE DVEDVRREIQ IMHHLAGHPN VISIKGAYED VVAVHLVMEL CSGGELFDRI IQRGHYTERK AAELARTIVG
601: VLETCHSLGV MHRDLKPENF LFVSREEDSL LKTIDFGLSM FFKPDEVFTD VVGSPYYVAP EVLRKRYGPE SDVWSAGVIV YILLSGVPPF WAETEQGIFE
701: QVLHGDLDFS SDPWPSISDG AKDLVQKMLV RDPKRRLTAH QVLCHPWVQI DGVAPDKPLD SAVLSRMKQF SAMNKFKKMA LRVIAESLSE EEIAGLKEMF
801: KMIDADNSGQ ITFEELKAGL KRVGANLKES EILDLMQAAD VDNSGTIDYK EFIAATLHLN KIEKEDHLFA AFSYFDKDGS GFITPDELQH ACEEFGVEDA
901: RIEEMMRDVD QDKDGRIDYN EFVAMMQKGS IMGGPMKMGL EKSISISLKH

Best Arabidopsis Sequence Match ( AT3G10660.2 )
(BLAST)

001: MGNACVGPNI SGNGFLQTVT AAMWRPRIGA EQASSSSHGN GQVSKEAASE PATDQVQNKP PEPITMPSSK TNPETKLKPD LEIQPEEKKE KVLAEETKQK
101: VVPEESKQEV PPEESKREVV VQPESAKPET KSESKPETTK PETTSETKPE TKAEPQKPKH MRRVSSAGLR TESVLQRKTE NFKEFYSLGR KLGQGQFGTT
201: FLCLEKGTGN EYACKSISKR KLLTDEDVED VRREIQIMHH LAGHPNVISI KGAYEDVVAV HLVMELCSGG ELFDRIIQRG HYTERKAAEL ARTIVGVLEA
301: CHSLGVMHRD LKPENFLFVS REEDSLLKTI DFGLSMFFKP DEVFTDVVGS PYYVAPEVLR KRYGPESDVW SAGVIVYILL SGVPPFWAET EQGIFEQVLH
401: GDLDFSSDPW PSISESAKDL VRKMLVRDPK RRLTAHQVLC HPWVQIDGVA PDKPLDSAVL SRMKQFSAMN KFKKMALRVI AESLSEEEIA GLKQMFKMID
501: ADNSGQITFE ELKAGLKRVG ANLKESEILD LMQAADVDNS GTIDYKEFIA ATLHLNKIER EDHLFAAFSY FDKDESGFIT PDELQQACEE FGVEDARIEE
601: MMRDVDQDKD GRIDYNEFVA MMQKGSIMGG PVKMGLENSI SISLKH

Arabidopsis Description

CPK2Calcium-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38870]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.