Factsheet for GSMUA_Achr4P22740_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P15620_001
GSMUA_Achr5P06840_001
GSMUA_Achr6P31880_001
GSMUA_Achr7P14260_001
GSMUA_Achr9P05400_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10660.1	GSMUA_Achr4P15620_001	AT5G24030.1	24280384
AT3G10660.1	GSMUA_Achr5P06840_001	AT5G24030.1	24280384
AT3G10660.1	GSMUA_Achr6P31880_001	AT5G24030.1	24280384
AT3G10660.1	GSMUA_Achr7P14260_001	AT5G24030.1	24280384
AT3G10660.1	GSMUA_Achr9P05400_001	AT5G24030.1	24280384

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	73.76	84.52
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	65.22	83.5
GSMUA_Achr9P25890_001	Banana	plastid	58.54	78.87
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	68.79	77.86
Solyc11g006370.1.1	Tomato	plastid	67.7	75.43
PGSC0003DMT400002592	Potato	plastid	67.39	75.09
Solyc10g081740.1.1	Tomato	cytosol	57.92	74.75
GSMUA_Achr7P01360_001	Banana	cytosol	77.48	74.37
Solyc04g009800.2.1	Tomato	cytosol, plastid	66.77	74.01
PGSC0003DMT400065419	Potato	plastid	66.77	74.01
KRG90147	Soybean	cytosol, plastid	66.46	73.92
KRH33395	Soybean	endoplasmic reticulum, nucleus	66.46	73.67
CDX70192	Canola	cytosol, plastid	65.22	73.43
CDX98791	Canola	cytosol, plastid	64.91	72.95
CDX80925	Canola	cytosol	64.29	72.25
CDY00963	Canola	plastid	64.29	72.13
CDY08584	Canola	cytosol	63.82	71.35
CDY11313	Canola	cytosol	65.06	71.26
Bra009420.1-P	Field mustard	cytosol, plastid	65.22	71.07
VIT_08s0032g01220.t01	Wine grape	cytosol	63.66	70.69
KRH72128	Soybean	plastid	63.82	70.02
GSMUA_Achr9P08680_001	Banana	cytosol	51.09	69.7
CDX73914	Canola	plastid	64.13	68.95
AT5G04870.1	Thale cress	cytosol, plastid	65.22	68.85
GSMUA_Achr10P...	Banana	cytosol, plastid	53.88	68.85
Bra005824.1-P	Field mustard	cytosol, plastid	64.75	68.81
GSMUA_Achr2P08110_001	Banana	cytosol, plastid	52.64	68.48
GSMUA_Achr6P25560_001	Banana	cytosol	50.93	68.19
CDY00688	Canola	plastid	63.35	68.0
Solyc01g006840.2.1	Tomato	cytosol	62.27	67.06
PGSC0003DMT400054983	Potato	cytosol	61.96	66.72
GSMUA_Achr3P13910_001	Banana	cytosol	54.04	65.54
GSMUA_Achr4P29450_001	Banana	cytosol	54.81	65.13
GSMUA_Achr1P15050_001	Banana	cytosol, plastid	55.59	64.5
PGSC0003DMT400072554	Potato	cytosol	60.71	64.42
AT3G10660.1	Thale cress	cytosol, plastid	64.6	64.4
KRH68038	Soybean	cytosol	58.85	64.24
GSMUA_Achr2P11030_001	Banana	cytosol	49.38	63.22
KRG96293	Soybean	cytosol	58.07	63.07
GSMUA_Achr6P31900_001	Banana	mitochondrion	42.55	62.84
GSMUA_Achr9P05370_001	Banana	cytosol	40.53	58.52
GSMUA_Achr6P16000_001	Banana	cytosol	44.72	58.3
GSMUA_Achr10P...	Banana	cytosol	45.03	57.65
GSMUA_Achr8P01680_001	Banana	cytosol	44.88	57.57
GSMUA_Achr2P06360_001	Banana	plasma membrane	45.81	57.17
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	55.59	56.74
GSMUA_Achr1P05040_001	Banana	cytosol	41.15	55.91
GSMUA_Achr8P21660_001	Banana	cytosol	40.53	55.06
GSMUA_Achr6P29450_001	Banana	cytosol	39.75	54.47
GSMUA_Achr5P27580_001	Banana	cytosol	45.5	53.56
Bra029859.1-P	Field mustard	plastid	63.66	43.16
Bra001373.1-P	Field mustard	plastid	64.6	42.89
GSMUA_Achr2P13980_001	Banana	plasma membrane	41.61	42.68
CDY00964	Canola	plastid	0.47	0.9
CDY00689	Canola	plastid	0.31	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G22740_001	EnsemblPlants:GSMUA_Achr4P22740_001
EnsemblPlants:GSMUA_Achr4T22740_001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0SR86	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF164	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002961526	SEG:seg	:

Description

Calcium-dependent protein kinase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G22740_001]

Coordinates

chr4:-:23025302..23030271

Molecular Weight (calculated)

72354.6 Da

IEP (calculated)

5.142

GRAVY (calculated)

-0.290

Length

644 amino acids

Sequence
(BLAST)

001: MGNTCVGPSL SKNGFFQSVS ATIWRNRSNK DDLPTSNGKA TGEGTEATPP KPDTDAPQPV KIQDDEAKPA KVPEADVAGL QVEFVLKSKT ENLKDVYSLG
101: RKLGQGQFGT TYLCIEKATG KEYACKSILK RKLTTEEDVD DVRREIQIMH HLSGNPNVIS IKEAYEDAVA VHVVMELCAG GELFDRIIQK GHYTERKAAE
201: LAKVIVGVVE ACHSMGVMHR DLKPENFLFV NQMEDARLKT IDFGLSIFFQ PVYWMCNTMD LAEKIVPSAL DHMSKRWYQH ELIYNLATAI IQMQDCASYR
301: EMRHRLLATS IIRFLCKQDL NYPLSGLLIV RFSFSGEIFT DVVGSPYYVA PEVLKKRYGP EADVWSAGVI IYILLSGVPP FWAETEQGIF EEVLHGTLDF
401: QSDPWPSISE SAKDLVRRML VRDPRRRMTA HEVLCHPWVQ IDGVAPDKPL DSAVLSRLKQ FSAMNKLKKM AIRVIAEHLS EDEIAGLKEM FKMIDTDNSG
501: QITYEELKAG LEKFGANLKE SEIYALMQAA DVDNSGTIDY GEFIAATLHL NKIEREDHLF AAFSYFDKDG SGYITQDELQ QACQEFGIED VRLEDMIRDV
601: DQDNDGRIDY NEFVAMMQKG NTGFGKKGVH ASFGIGFREA LKIG

Best Arabidopsis Sequence Match ( AT2G38910.1 )
(BLAST)

001: MGNTCVGPNL NPNGFLQSVS AAVWRNQKPD DSIKSSKDES SRKKNDKSVN GDDSNGHVSS TVDPAPSTLP TPSTPPPPVK MANEEPPPKP ITENKEDPNS
101: KPQKKEAHMK RMASAGLQID SVLGRKTENL KDIYSVGRKL GQGQFGTTFL CVDKKTGKEF ACKTIAKRKL TTPEDVEDVR REIQIMHHLS GHPNVIQIVG
201: AYEDAVAVHV VMEICAGGEL FDRIIQRGHY TEKKAAELAR IIVGVIEACH SLGVMHRDLK PENFLFVSGD EEAALKTIDF GLSVFFKPGE TFTDVVGSPY
301: YVAPEVLRKH YSHECDVWSA GVIIYILLSG VPPFWDETEQ GIFEQVLKGD LDFISEPWPS VSESAKDLVR RMLIRDPKKR MTTHEVLCHP WARVDGVALD
401: KPLDSAVLSR LQQFSAMNKL KKIAIKVIAE SLSEEEIAGL KEMFKMIDTD NSGHITLEEL KKGLDRVGAD LKDSEILGLM QAADIDNSGT IDYGEFIAAM
501: VHLNKIEKED HLFTAFSYFD QDGSGYITRD ELQQACKQFG LADVHLDDIL REVDKDNDGR IDYSEFVDMM QDTGFGKMGL KVS

Arabidopsis Description

CPK20CPK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VWI7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.