Factsheet for GSMUA_Achr4P29450_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47496	Canola	cytosol	76.57	86.64
CDY59100	Canola	cytosol	75.09	84.62
CDY54794	Canola	cytosol	75.09	84.62
GSMUA_Achr2P11030_001	Banana	cytosol	76.38	82.31
Solyc01g112250.2.1	Tomato	cytosol	81.0	82.21
KRH74107	Soybean	cytosol	83.03	81.97
AT2G17290.2	Thale cress	cytosol	81.55	81.25
CDX69129	Canola	nucleus, plasma membrane	80.81	80.51
CDX75493	Canola	cytosol	80.81	80.37
AT4G38230.2	Thale cress	cytosol	76.2	80.35
CDY07866	Canola	cytosol	79.89	80.33
CDX87997	Canola	cytosol	79.7	80.15
KRH14008	Soybean	cytosol	82.47	80.11
Bra009653.1-P	Field mustard	cytosol	79.52	79.96
Solyc10g074570.1.1	Tomato	cytosol, plastid	81.92	79.71
GSMUA_Achr3P13910_001	Banana	cytosol	78.04	79.66
CDY26800	Canola	cytosol	80.26	79.38
PGSC0003DMT400043320	Potato	cytosol, plastid	82.29	78.66
CDX72530	Canola	cytosol	72.51	78.6
Bra037277.1-P	Field mustard	cytosol	79.7	78.4
AT4G35310.1	Thale cress	cytosol	80.07	78.06
CDY52603	Canola	cytosol	64.21	77.85
GSMUA_Achr1P15050_001	Banana	cytosol, plastid	79.7	77.84
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	89.48	76.86
VIT_03s0038g03960.t01	Wine grape	cytosol	83.03	74.5
GSMUA_Achr9P08680_001	Banana	cytosol	61.44	70.55
GSMUA_Achr6P25560_001	Banana	cytosol	61.81	69.65
GSMUA_Achr2P08110_001	Banana	cytosol, plastid	62.73	68.69
GSMUA_Achr10P...	Banana	cytosol, plastid	63.47	68.25
GSMUA_Achr9P25890_001	Banana	plastid	57.2	64.85
GSMUA_Achr6P31900_001	Banana	mitochondrion	51.84	64.45
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	58.67	63.22
GSMUA_AchrUn_...	Banana	cytosol	65.13	62.81
GSMUA_Achr6P16000_001	Banana	cytosol	54.24	59.51
GSMUA_Achr2P06360_001	Banana	plasma membrane	55.72	58.53
GSMUA_Achr9P05370_001	Banana	cytosol	48.16	58.52
GSMUA_Achr10P...	Banana	cytosol	53.69	57.85
GSMUA_Achr1P05040_001	Banana	cytosol	50.55	57.81
GSMUA_Achr8P01680_001	Banana	cytosol	53.51	57.77
GSMUA_Achr8P21660_001	Banana	cytosol	49.82	56.96
GSMUA_Achr6P29450_001	Banana	cytosol	48.89	56.38
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	65.13	54.81
GSMUA_Achr5P27580_001	Banana	cytosol	54.43	53.93
GSMUA_Achr7P01360_001	Banana	cytosol	64.76	52.31
Bra033557.1-P	Field mustard	endoplasmic reticulum	76.75	46.48
GSMUA_Achr2P13980_001	Banana	plasma membrane	50.55	43.63

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G29450_001	EnsemblPlants:GSMUA_Achr4P29450_001
EnsemblPlants:GSMUA_Achr4T29450_001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0ST57	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296C103	SEG:seg	:

Description

Calcium-dependent protein kinase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29450_001]

Coordinates

chr4:-:27403393..27410150

Molecular Weight (calculated)

60350.3 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.267

Length

542 amino acids

Sequence
(BLAST)

001: MGNSCRGSFG SKYHRRSSAE PPSSKCLHQS ECSSVPDDSP KKPPKQQREA AAAVIMRRGF DPSSNYVLGH KTPDIRDLYI LGRKLGQGQF GTTYLCTEIA
101: TGNDYACKSI AKRKLISKED VEDVRREIQI MHHLSGHKNV VTIKGAFEDA LYVHIVMELC SGGELFDRII ERGHFSERKA AELIRIIVGV VEACHSLGVM
201: HRDLKPENFL LVNKDDDSSL KAIDFGLSVF FKPGQIFTDV VGSPYYVAPE VLCKHYGPEA DVWTAGVILY ILLSGVPPFW AETQQGIFDA IMKGVIDFDS
301: DPWPLISESA KVLIKKMLCS LPSERLTAHQ VLCHPWICEH GVAPDRALDP AVLSRLKQFS AMNKLKKMAL RVIAEGLSEE EIAGLREMFQ AMDTDNSGSI
401: TFDELKAGLR RYGSTLKDTE IRDLMEAADV DNSGTIDYGE FIAATVHLNK LEREEHLVAA FSYFDKDGSG YITVDELQQA CKEHNMTDAS LEDIIREVDQ
501: DNDGRIDYSE FVAMMRKGTM GIGRRTLRNS LNVSMRDAPG AL

Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.