Factsheet for GSMUA_Achr3P13910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15050_001	Banana	cytosol, plastid	88.51	84.68
GSMUA_Achr4P29450_001	Banana	cytosol	79.66	78.04
GSMUA_Achr2P11030_001	Banana	cytosol	72.13	76.14
OQU86029	Sorghum	cytosol	71.94	75.79
GSMUA_Achr9P08680_001	Banana	cytosol	63.28	71.19
Os02t0832000-01	Rice	plasma membrane	71.19	69.36
GSMUA_Achr6P25560_001	Banana	cytosol	62.52	69.02
GSMUA_Achr2P08110_001	Banana	cytosol, plastid	63.09	67.68
TraesCS6D01G404800.1	Wheat	cytosol	71.37	67.56
HORVU6Hr1G094990.2	Barley	cytosol, plastid	72.13	67.43
TraesCS6A01G421000.1	Wheat	cytosol	71.19	67.38
GSMUA_Achr10P...	Banana	cytosol, plastid	63.84	67.26
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	79.66	67.04
TraesCS6B01G467300.1	Wheat	cytosol	71.0	66.37
GSMUA_Achr9P25890_001	Banana	plastid	59.7	66.32
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	60.83	64.21
GSMUA_Achr6P31900_001	Banana	mitochondrion	51.98	63.3
GSMUA_AchrUn_...	Banana	cytosol	65.35	61.74
GSMUA_Achr9P05370_001	Banana	cytosol	49.15	58.52
GSMUA_Achr6P16000_001	Banana	cytosol	54.05	58.1
GSMUA_Achr8P01680_001	Banana	cytosol	54.24	57.37
GSMUA_Achr10P...	Banana	cytosol	54.05	57.06
GSMUA_Achr2P06360_001	Banana	plasma membrane	54.61	56.2
GSMUA_Achr6P29450_001	Banana	cytosol	49.34	55.74
GSMUA_Achr8P21660_001	Banana	cytosol	49.15	55.06
GSMUA_Achr1P05040_001	Banana	cytosol	48.96	54.85
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	65.54	54.04
GSMUA_Achr5P27580_001	Banana	cytosol	54.61	53.02
GSMUA_Achr7P01360_001	Banana	cytosol	64.6	51.12
GSMUA_Achr2P13980_001	Banana	plasma membrane	51.04	43.15

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G13910_001	EnsemblPlants:GSMUA_Achr3P13910_001
EnsemblPlants:GSMUA_Achr3T13910_001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0SEF8	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF188	InterPro:Prot_kinase_dom	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295C1D2	SEG:seg	:	:	:

Description

Calcium-dependent protein kinase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G13910_001]

Coordinates

chr3:+:13020805..13026606

Molecular Weight (calculated)

59047.0 Da

IEP (calculated)

4.980

GRAVY (calculated)

-0.344

Length

531 amino acids

Sequence
(BLAST)

001: MGNTCRGGSL VGSRYFPSYS GPTDRSSSCS SSDGTPRYHL SFSHLDPDEP PQPAAKPDRD GAMRRSGDGS ATWVLGHRTA NLRDLYTLGR KLGQGQFGTT
101: YLCTEDVEDV RREIQIMHHL SGHKNVVTIK GAYEDPLYVH IVMELCEGGE LFDRIIQRGH YSELKAAELT RIIVGVVEAC HSLGVMHRDL KPENFLLANR
201: DDDSSLKAID FGLSVFFKPG QIFTDVVGSP YYVAPEVLCK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG VIDFDSEPWP MISDSAKDLI
301: RKMLCSRPSD RLTAHEVLCH PWICENGVAP DQALDPAVLS RLKQFSAMNK LKKMALRVIA ESLSEEEIAG LKEMFQAMDT DSSGAITFDE LKEGLRRYGS
401: NLKESEIRSL MDAADVDNSG TIDYGEFVAA TIHLNKLERE EHLVAAFSYF DKDGSGYITV DELQQACKDH NMTDVQIDDI IREVDQDNDG RIDYGEFVAM
501: MQKGNMGHGR ITMQRMRNSL NISMKDAPGA H

Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.