Factsheet for TraesCS6D01G404800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G421000.1	Wheat	cytosol	99.29	99.29
TraesCS6B01G467300.1	Wheat	cytosol	98.22	97.01
HORVU6Hr1G094990.2	Barley	cytosol, plastid	93.76	92.61
OQU86029	Sorghum	cytosol	76.83	85.52
Os02t0832000-01	Rice	plasma membrane	75.4	77.61
CDY59100	Canola	cytosol	65.78	76.72
CDY54794	Canola	cytosol	65.78	76.72
CDY47496	Canola	cytosol	65.06	76.2
AT4G38230.2	Thale cress	cytosol	66.31	72.37
Solyc01g112250.2.1	Tomato	cytosol	68.27	71.72
GSMUA_Achr3P13910_001	Banana	cytosol	67.56	71.37
KRH74107	Soybean	cytosol	68.81	70.31
CDY07866	Canola	cytosol	67.02	69.76
CDX87997	Canola	cytosol	67.02	69.76
Bra009653.1-P	Field mustard	cytosol	67.02	69.76
GSMUA_Achr1P15050_001	Banana	cytosol, plastid	68.81	69.55
AT2G17290.2	Thale cress	cytosol	67.2	69.3
CDX69129	Canola	nucleus, plasma membrane	67.2	69.3
KRH14008	Soybean	cytosol	68.81	69.18
CDX75493	Canola	cytosol	67.2	69.17
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	68.45	69.06
TraesCS6D01G242000.2	Wheat	mitochondrion	67.38	68.98
Solyc10g074570.1.1	Tomato	cytosol, plastid	68.45	68.94
CDY26800	Canola	cytosol	66.84	68.43
AT4G35310.1	Thale cress	cytosol	67.56	68.17
PGSC0003DMT400043320	Potato	cytosol, plastid	68.81	68.08
CDX72530	Canola	cytosol	60.43	67.8
CDY52603	Canola	cytosol	54.01	67.79
Bra037277.1-P	Field mustard	cytosol	66.49	67.7
VIT_03s0038g03960.t01	Wine grape	cytosol	69.52	64.57
TraesCS1D01G433400.1	Wheat	cytosol, golgi	52.23	63.7
TraesCS4D01G107200.1	Wheat	plastid	56.33	61.48
TraesCS5D01G122800.1	Wheat	cytosol	55.97	59.36
TraesCS4D01G318400.2	Wheat	cytosol	57.58	58.94
TraesCS2D01G249900.2	Wheat	cytosol, plastid	58.82	58.72
TraesCS3D01G327700.3	Wheat	plastid	54.37	58.65
TraesCS1D01G308800.1	Wheat	plastid	52.41	56.87
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	52.41	56.76
TraesCS4D01G125500.1	Wheat	cytosol	52.58	55.45
TraesCS5D01G434800.2	Wheat	cytosol	60.07	55.25
TraesCS5D01G124000.1	Wheat	plastid	59.36	53.37
TraesCS5D01G153800.1	Wheat	cytosol	51.34	53.23
TraesCS2D01G229100.2	Wheat	cytosol	51.34	53.23
TraesCS5D01G434500.2	Wheat	cytosol	59.0	53.04
TraesCS2D01G404200.1	Wheat	cytosol	48.66	51.12
Bra033557.1-P	Field mustard	endoplasmic reticulum	66.31	41.56

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF142	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G404800
EnsemblPlants:TraesCS6D01G404800.1	TIGR:cd05117	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:472357064..472359115

Molecular Weight (calculated)

61761.0 Da

IEP (calculated)

5.068

GRAVY (calculated)

-0.319

Length

561 amino acids

Sequence
(BLAST)

001: MGNSCHGSIV PAAGDGRHHY RTSCSSSDWD SDSSSPVLDR APHRNTIMGR GAGHQHQLSS PTAVLGHQTP LLRDLYDVGR KLGQGQFGTT YLCTEISTGV
101: AFACKSIAKR KLLTPEDVED VRREIQIMHH LAGHDSVVTI KGAYEDAQFV HIVMELCEGG ELFDRIVQRG YFSERRAAEI ARVIVGVVEA CHSLGVMHRD
201: LKPENFLLKD KEENNNNNNG SGNSVNEPAG DKVNLKAIDF GLSVFFKPGQ IFTDVVGSPY YVAPEVLCKH YGPEADVWTA GVIVYILLSG VPPFWAETQQ
301: GIFDAVLKGA IDFDSDPWPN ISDGAKDLIR KMLKSPPAER FTAHQVLCHP WIIENGEAPD APLDPAVLSR LKQFSAMNRL KKMALRVIAR GLSEEELAGL
401: KEMFKTMDTD GSGAITFEEL REGLRRYGST ELRDSEVRDL MEAADVDNSG TIDYDEFIAA TVHMNKLDRE EHLMAAFSYF DKDGSGYITV DELEVACREH
501: NMADVGIDDI IREVDQDNDG RIDYGEFVAM MKKGIIGNGR LTMRHTSDGS ILHGAGSGLS S

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.