Factsheet for TraesCS4D01G318400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G490200.1	Wheat	cytosol	98.91	98.91
HORVU4Hr1G082790.1	Barley	cytosol	97.26	97.26
TraesCS4B01G321800.1	Wheat	cytosol	96.72	96.72
EER95585	Sorghum	cytosol	81.57	82.17
Zm00001d027480_P002	Maize	cytosol	80.66	81.25
TraesCS6D01G242000.2	Wheat	mitochondrion	61.86	61.86
TraesCS2D01G456400.1	Wheat	cytosol, mitochondrion	62.41	61.51
TraesCS4D01G107200.1	Wheat	plastid	54.74	58.37
TraesCS1D01G433400.1	Wheat	cytosol, golgi	48.72	58.04
TraesCS6D01G404800.1	Wheat	cytosol	58.94	57.58
TraesCS5D01G122800.1	Wheat	cytosol	53.47	55.39
TraesCS2D01G249900.2	Wheat	cytosol, plastid	54.38	53.02
TraesCS3D01G327700.3	Wheat	plastid	49.45	52.12
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	48.54	51.35
TraesCS4D01G125500.1	Wheat	cytosol	49.27	50.75
TraesCS1D01G308800.1	Wheat	plastid	47.81	50.68
TraesCS5D01G434800.2	Wheat	cytosol	55.47	49.84
TraesCS5D01G434500.2	Wheat	cytosol	56.57	49.68
TraesCS5D01G124000.1	Wheat	plastid	55.84	49.04
TraesCS5D01G153800.1	Wheat	cytosol	48.18	48.8
TraesCS2D01G229100.2	Wheat	cytosol	46.9	47.5
TraesCS2D01G404200.1	Wheat	cytosol	45.8	47.0

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	PFAM:PF13833	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF119	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4D01G318400	EnsemblPlants:TraesCS4D01G318400.2	TIGR:cd00051	TIGR:cd05117	SEG:seg	:

Description

No Description!

Coordinates

chr4D:+:482773613..482777077

Molecular Weight (calculated)

61329.3 Da

IEP (calculated)

5.310

GRAVY (calculated)

-0.304

Length

548 amino acids

Sequence
(BLAST)

001: MGNQNGTPGN DYYNRFPREH PASRYADGIE DDSYSDLKKS DKPWPDADSF RPTAAGILRQ GLDPTSISVL GRKTADLREH YILGRKLGQG QFGTTYLCTE
101: ISTGCDFACK TILKRKLITK VDVEDVRREI QIMHHLSGHK NVVSIKDVYE DAQAVHIVME LLPGGELFDR IQGNGRYSEM KAAEITRIVV SIVAMCHSLG
201: VMHRDLKPEN FLLLDKDNDL SIKAIDFGLS VYFKPGQVFS ELVGSPFYVA PEVLHKRYGP ESDVWSAGVI LYVLLSGVPP FWADTQKGIF DAVLKGHLDL
301: ESDPWPKISD SAKDLIRKML CNCPSERLKA HEVLRHPWIC QNGMATDGVL DPSVISRLKR FSAMNNLQKL ALRVIAERLS EEEIAGLREL FKTVDIKNRG
401: VITFGELRKG LTRYGNELVE TEICDIMEAA DTDTDVTINY KEFIAATMPL NKIEREEHLK AAFTYFDKDG SGYITVDKLQ RACAEYNMEG TLLEEIILEA
501: DQNNDGQIDY AEFVAMMQGN ANGGNIGLGR PTLETSLNVT LRDAAQVH

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.