Factsheet for Zm00001d027480_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95585	Sorghum	cytosol	95.22	95.22
TraesCS5A01G490200.1	Wheat	cytosol	81.62	81.02
TraesCS4B01G321800.1	Wheat	cytosol	81.43	80.84
TraesCS4D01G318400.2	Wheat	cytosol	81.25	80.66
HORVU4Hr1G082790.1	Barley	cytosol	80.88	80.29
Zm00001d029758_P004	Maize	cytosol	64.52	65.0
Zm00001d002540_P002	Maize	cytosol, mitochondrion	64.34	63.99
Zm00001d026018_P001	Maize	mitochondrion	64.71	63.31
Zm00001d051502_P004	Maize	mitochondrion	64.52	62.46
Zm00001d053016_P002	Maize	cytosol, plastid	55.15	59.06
Zm00001d004812_P002	Maize	plastid	54.96	58.63
Zm00001d034376_P001	Maize	plastid	59.19	55.52
Zm00001d013105_P004	Maize	cytosol, plastid	59.01	54.97
Zm00001d023560_P002	Maize	cytosol	38.97	54.36
Zm00001d043150_P002	Maize	plastid	51.1	53.46
Zm00001d012552_P005	Maize	plastid	51.1	53.46
Zm00001d010659_P001	Maize	plastid	50.92	53.27
Zm00001d011392_P001	Maize	cytosol, plastid	51.29	52.64
Zm00001d009708_P001	Maize	mitochondrion	52.02	52.5
Zm00001d044185_P005	Maize	cytosol, mitochondrion	50.55	52.48
Zm00001d007912_P009	Maize	cytosol, plastid	57.54	52.43
Zm00001d034372_P001	Maize	cytosol	58.64	52.12
Zm00001d021623_P001	Maize	plasma membrane	50.55	51.79
Zm00001d040996_P003	Maize	plastid	57.72	51.56
Zm00001d006479_P005	Maize	plasma membrane	50.18	51.41
Zm00001d013109_P002	Maize	plasma membrane	58.46	51.29
Zm00001d004998_P001	Maize	cytosol	49.63	48.91
Zm00001d052438_P001	Maize	cytosol, plastid	49.26	48.82
Zm00001d026139_P001	Maize	cytosol	45.59	41.82

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100383301	MapMan:18.4.5.4	Gene3D:3.30.200.20	EMBL:BT066842
UniProt:C0PEX3	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	ProteinID:ONL93237.1	PFAM:PF00069
PFAM:PF13499	PFAM:PF13833	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF119	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000195CA12	EnsemblPlantsGene:Zm00001d027480
EnsemblPlants:Zm00001d027480_P002	EnsemblPlants:Zm00001d027480_T002	:	:	:	:

Description

Calcium-dependent protein kinase 6

Coordinates

chr1:+:6270311..6275109

Molecular Weight (calculated)

61654.8 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.329

Length

544 amino acids

Sequence
(BLAST)

001: MGNQCPNGTL GSDYYNRPTS RFADGCLEDD RYSDLKKFDK PWPEVNSFKP TAVGILKRGL DPTSITVLER KTADIREHYI IGRRLGQGQF GTTFLCTEIS
101: TGCEYACKTI PKRKLITKED VEDVRREIQI MHHLSGHKNV VSIKDVYEDG QAVYIVMELC AGGELFDRIQ EKGHYSEQKA AELIRIIISL VAMCHSLGVM
201: HRDLKPENFL LWDKEDDLSI KAIDFGLSVF FKPGQVFTEL VGSPYYVAPE VLHKRYGPEA DVWSAGVILY VLLSGVPPFW AETQQGIFDA VLKGHIDFDS
301: DPWPKISESA KNLIRKMLCP CPSERLKAHE VLRHPWICEN GVATDQALDP GVLSRLKQFS TMNKLKKLAL RVIAERLSEE EIAGLRQMFK AVDVQNRGVI
401: TFGELRQGLK RYGSELENRE ISDIMEVADN DNNVTINYEE FIAATVPLNK IEREEHLMAA FTYFDKDGSG YITVDKLQRA CGEHDMDDTF LEEIILEVDQ
501: NNDGQIDYAE FVAMMQGSKV GLGWQQMETT LNVTLRDAPQ VHCH

Best Arabidopsis Sequence Match ( AT2G17290.1 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.