Factsheet for Zm00001d006479_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18521681
extracellular: 20408568
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 18521681 doi

P Carletti, A Masi, B Spolaore, P Polverino De Laureto, M De Zorzi, L Turetta, M Ferretti, S Nardi

Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021623_P001	Maize	plasma membrane	96.61	96.61
KXG36322	Sorghum	cytosol	96.61	96.61
Os07t0515100-01	Rice	cytosol	93.22	92.87
TraesCS2B01G248700.2	Wheat	cytosol	90.4	90.23
TraesCS2A01G223100.2	Wheat	cytosol	90.21	90.04
HORVU2Hr1G046660.1	Barley	cytosol	87.19	85.58
TraesCS2D01G229100.2	Wheat	cytosol	86.82	85.21
GSMUA_Achr6P29450_001	Banana	cytosol	67.04	75.74
VIT_19s0090g00410.t01	Wine grape	cytosol	75.52	74.81
Solyc12g005040.1.1	Tomato	cytosol	14.5	74.76
VIT_10s0116g01800.t01	Wine grape	cytosol	72.32	74.71
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	71.56	74.66
Solyc07g064610.2.1	Tomato	nucleus	72.69	74.09
PGSC0003DMT400057484	Potato	cytosol	72.5	73.9
KRH73749	Soybean	nucleus	73.26	73.67
KRH46181	Soybean	nucleus	76.27	73.5
CDX97315	Canola	cytosol, plasma membrane	71.56	73.08
Bra018504.1-P	Field mustard	cytosol	71.56	73.08
KRG98764	Soybean	cytosol	75.52	72.78
KRH14398	Soybean	cytosol, nucleus	73.63	72.54
CDY36037	Canola	nucleus, plasma membrane	72.32	72.32
KRH51083	Soybean	endoplasmic reticulum	71.94	72.21
KRH02072	Soybean	endoplasmic reticulum, nucleus	72.88	71.93
CDX82244	Canola	cytosol	72.32	71.91
CDX91224	Canola	cytosol	58.76	71.89
Solyc03g031670.2.1	Tomato	cytosol	74.39	71.43
Bra001789.1-P	Field mustard	cytosol	72.88	71.4
AT4G04720.2	Thale cress	cytosol	71.37	71.37
Solyc02g032820.2.1	Tomato	cytosol, plastid	56.5	69.93
AT1G50700.2	Thale cress	cytosol	71.56	69.47
CDX82886	Canola	nucleus, plasma membrane	70.43	67.15
CDX79112	Canola	cytosol	70.62	66.61
AT4G21940.2	Thale cress	cytosol, plastid	69.87	66.13
Bra013575.1-P	Field mustard	cytosol	71.0	65.79
CDY43077	Canola	cytosol	64.22	65.33
CDY24863	Canola	cytosol	66.67	65.19
CDY07254	Canola	cytosol	66.48	65.01
AT1G61950.1	Thale cress	cytosol	66.1	63.7
Zm00001d010659_P001	Maize	plastid	61.21	62.5
Zm00001d043150_P002	Maize	plastid	60.45	61.73
Zm00001d044185_P005	Maize	cytosol, mitochondrion	60.64	61.45
Zm00001d012552_P005	Maize	plastid	60.08	61.35
Bra029513.1-P	Field mustard	cytosol	55.37	61.12
Zm00001d011392_P001	Maize	cytosol, plastid	60.64	60.75
Zm00001d009708_P001	Maize	mitochondrion	61.58	60.67
Bra021305.1-P	Field mustard	cytosol	59.7	60.27
GSMUA_Achr2P13980_001	Banana	plasma membrane	71.19	60.19
AT4G04695.1	Thale cress	cytosol	54.8	60.12
Zm00001d053016_P002	Maize	cytosol, plastid	55.37	57.87
Zm00001d004812_P002	Maize	plastid	55.37	57.65
Zm00001d004998_P001	Maize	cytosol	59.89	57.61
Zm00001d052438_P001	Maize	cytosol, plastid	59.13	57.19
Zm00001d026139_P001	Maize	cytosol	62.9	56.32
Zm00001d002540_P002	Maize	cytosol, mitochondrion	55.93	54.3
Zm00001d026018_P001	Maize	mitochondrion	55.93	53.42
Zm00001d023560_P002	Maize	cytosol	38.79	52.82
Zm00001d051502_P004	Maize	mitochondrion	55.56	52.49
Zm00001d034376_P001	Maize	plastid	55.18	50.52
Zm00001d034372_P001	Maize	cytosol	58.0	50.33
Zm00001d007912_P009	Maize	cytosol, plastid	56.5	50.25
Zm00001d027480_P002	Maize	cytosol	51.41	50.18
Zm00001d013105_P004	Maize	cytosol, plastid	55.18	50.17
Zm00001d013109_P002	Maize	plasma membrane	57.25	49.03
Zm00001d040996_P003	Maize	plastid	55.93	48.77
Zm00001d029758_P004	Maize	cytosol	44.63	43.89

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	EntrezGene:542226	EMBL:BT064934
EMBL:BT067736	ncoils:Coil	EMBL:D85039	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002048
InterPro:Kinase-like_dom_sf	ProteinID:ONM24001.1	ProteinID:ONM24002.1	ProteinID:ONM24004.1	PFAM:PF00069	PFAM:PF13499
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF174	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q41790	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000009D1C5	EnsemblPlantsGene:Zm00001d006479	EnsemblPlants:Zm00001d006479_P005
EnsemblPlants:Zm00001d006479_T005	SEG:seg	:	:	:	:

Description

calcium dependent protein kinase3 calcium dependent protein kinase3

Coordinates

chr2:-:209563872..209567992

Molecular Weight (calculated)

59356.0 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.440

Length

531 amino acids

Sequence
(BLAST)

001: MGQCCSRAPA PDSGRGGTNG YGYSNQAKPA QTPSSYNPPQ QPAEVRYTPP ATNPPVVPPV PVPPKPTADT ILGKQYEDVR SVYSLGKELG RGQFGVTYLC
101: TEVASGKQYA CKSISKRKLT SKADREDIRR EIQIMQHLSG QPNIVEFRGA YEDKSNVHVV MELCAGGELF DRIIAKGHYT ERAAATICRA VVNVVNICHF
201: MGVMHRDLKP ENFLLASKEE NAMLKATDFG LSVFIEEGKM YRDIVGSAYY VAPEVLKRSY GKEIDVWSAG VILYILLSGV PPFWAETEKG IFDAILHEEI
301: DFESQPWPSI SESAKDLVRK MLTRDPKKRL TSAQVLQHSW LREGGGASDK PIDSAVLSRM KQFRAMNKLK KMALKVIASN LNEEEIKGLK QMFMNMDTDN
401: SGTITYEELK AGLAKLGSKL SEAEVKQLME AADVDGNGSI DYVEFITATM HRHKLERDEY LFKAFQYFDK DNSGFITRDE LESALIEHEM GDTSTIKEII
501: SEVDTDNDGR INYEEFCAMM RGGMQQPMRL K

Best Arabidopsis Sequence Match ( AT3G20410.1 )
(BLAST)

001: MGNCFAKNHG LMKPQQNGNT TRSVEVGVTN QDPPSYTPQA RTTQQPEKPG SVNSQPPPWR AAAAAPGLSP KTTTKSNSIL ENAFEDVKLF YTLGKELGRG
101: QFGVTYLCTE NSTGKKYACK SISKKKLVTK ADKDDMRREI QIMQHLSGQP NIVEFKGAYE DEKAVNLVME LCAGGELFDR IIAKGHYTER AAASVCRQIV
201: NVVKICHFMG VLHRDLKPEN FLLSSKDEKA LIKATDFGLS VFIEEGKVYR DIVGSAYYVA PEVLRRRYGK EVDIWSAGII LYILLSGVPP FWAETEKGIF
301: DAILEGHIDF ESQPWPSISS SAKDLVRRML TADPKRRISA ADVLQHPWLR EGGEASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENID TEEIQGLKAM
401: FANIDTDNSG TITYEELKEG LAKLGSKLTE AEVKQLMDAA DVDGNGSIDY IEFITATMHR HRLESNENLY KAFQHFDKDS SGYITIDELE SALKEYGMGD
501: DATIKEVLSD VDSDNDGRIN YEEFCAMMRS GNPQQQQPRL F

Arabidopsis Description

CPK9Calcium-dependent protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q38868]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.