CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 24646378
plasma membrane: 24646378

gfp PMID: 24646378 doi

H Zhang, WZ Liu, Y Zhang, M Deng, F Niu, B Yang, X Wang, B Wang, W Liang, MK Deyholos, YQ Jiang

State Key Laboratory of Crop Stress Biology for Arid Areas and College of Life Sciences, Northwest A & F University, Yangling, Shaanxi 712100, China. yangwl@nwafu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82244	Canola	cytosol	99.62	99.06
Bra001789.1-P	Field mustard	cytosol	99.62	97.6
AT1G50700.2	Thale cress	cytosol	87.76	85.19
CDY43077	Canola	cytosol	77.78	79.12
KRH73749	Soybean	nucleus	76.65	77.08
KRH14398	Soybean	cytosol, nucleus	77.59	76.44
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	72.32	75.44
Solyc07g064610.2.1	Tomato	nucleus	73.63	75.05
PGSC0003DMT400057484	Potato	cytosol	73.63	75.05
VIT_19s0090g00410.t01	Wine grape	cytosol	75.14	74.44
KRH46181	Soybean	nucleus	77.02	74.23
KRG98764	Soybean	cytosol	77.02	74.23
Solyc12g005040.1.1	Tomato	cytosol	14.31	73.79
TraesCS2B01G248700.2	Wheat	cytosol	73.63	73.5
TraesCS2A01G223100.2	Wheat	cytosol	73.63	73.5
Os07t0515100-01	Rice	cytosol	72.69	72.42
KXG36322	Sorghum	cytosol	72.32	72.32
Zm00001d006479_P005	Maize	plasma membrane	72.32	72.32
Zm00001d021623_P001	Maize	plasma membrane	72.32	72.32
GSMUA_Achr6P29450_001	Banana	cytosol	62.9	71.06
CDX97315	Canola	cytosol, plasma membrane	68.93	70.38
HORVU2Hr1G046660.1	Barley	cytosol	71.0	69.69
TraesCS2D01G229100.2	Wheat	cytosol	71.0	69.69
CDX91224	Canola	cytosol	56.5	69.12
CDY10955	Canola	cytosol	47.65	67.29
CDX82886	Canola	nucleus, plasma membrane	68.74	65.53
CDX79112	Canola	cytosol	68.74	64.83
CDY24863	Canola	cytosol	64.6	63.17
CDY07254	Canola	cytosol	64.41	62.98
CDX97174	Canola	cytosol	61.39	62.45
CDX69700	Canola	cytosol	61.39	62.45
CDY63783	Canola	cytosol	60.45	62.09
CDY44912	Canola	cytosol	60.45	62.09
CDX92536	Canola	cytosol	60.45	62.09
CDY13993	Canola	cytosol	60.26	61.9
CDY66815	Canola	cytosol, plastid	63.84	61.41
CDX73219	Canola	cytosol, mitochondrion	63.84	61.41
CDX78468	Canola	cytosol	60.26	61.19
CDX70450	Canola	cytosol	60.08	60.99
CDX85697	Canola	cytosol	58.38	60.43
CDY44125	Canola	cytosol, plastid	59.51	60.19
CDX91168	Canola	cytosol	58.76	59.66
CDY54853	Canola	plastid	58.95	59.62
CDY47496	Canola	cytosol	53.11	58.87
CDY54794	Canola	cytosol	52.35	57.8
GSMUA_Achr2P13980_001	Banana	plasma membrane	68.17	57.64
CDY59100	Canola	cytosol	52.17	57.59
CDX87164	Canola	cytosol	51.41	56.29
CDX80376	Canola	cytosol	51.79	56.01
CDY16860	Canola	cytosol	51.22	55.97
CDY37101	Canola	cytosol	51.79	55.33
CDX90725	Canola	cytosol	51.98	55.2
CDY05064	Canola	cytosol	51.98	55.2
CDX73342	Canola	nucleus, plasma membrane	51.6	55.13
CDY46963	Canola	cytosol	44.07	54.93
CDY46964	Canola	cytosol	49.34	54.24
CDX92440	Canola	cytosol	50.09	53.85
CDY46962	Canola	cytosol	46.89	53.78
CDY40788	Canola	cytosol	48.96	53.72
CDY07866	Canola	cytosol	54.43	53.62
CDY52603	Canola	cytosol	45.01	53.47
CDX87997	Canola	cytosol	54.24	53.43
CDY16557	Canola	cytosol	48.78	53.18
CDX69129	Canola	nucleus, plasma membrane	54.24	52.94
CDX75493	Canola	cytosol	54.24	52.84
CDY40790	Canola	cytosol	45.95	52.81
CDY26800	Canola	cytosol	54.24	52.55
CDX80925	Canola	cytosol	55.56	51.48
CDX98791	Canola	cytosol, plastid	55.37	51.31
CDX70192	Canola	cytosol, plastid	55.18	51.22
CDY00963	Canola	plastid	55.37	51.22
CDX72530	Canola	cytosol	48.21	51.2
CDY40789	Canola	cytosol	49.53	51.17
CDY08584	Canola	cytosol	54.99	50.69
CDY11313	Canola	cytosol	55.74	50.34
CDY62741	Canola	endoplasmic reticulum, plasma membrane	58.0	50.08
CDY40426	Canola	cytosol	37.85	49.02
CDY00688	Canola	plastid	54.61	48.33
CDX73914	Canola	plastid	54.24	48.08
CDY07688	Canola	cytosol	49.34	47.64
CDY14419	Canola	cytosol	49.34	47.64
CDY32077	Canola	cytosol	39.74	40.73
CDX88038	Canola	cytosol	51.79	30.42
CDY00689	Canola	plastid	0.38	0.6
CDY00964	Canola	plastid	0.38	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078HE16	UniProt:A0A078HE16
EnsemblPlants:CDY36037	ProteinID:CDY36037	ProteinID:CDY36037.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00059850001
InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF177
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDF8AB	SEG:seg	:	:	:

Description

BnaC03g41610DBnaC03g41610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE16]

Coordinates

chrLK032366:-:32665..35654

Molecular Weight (calculated)

59580.0 Da

IEP (calculated)

5.843

GRAVY (calculated)

-0.494

Length

531 amino acids

Sequence
(BLAST)

001: MGNCFAKNHG LMKPQQNGQT RSVEVDQTHQ DPPHTPEKRS SETNQPPPWR MAAPAPSPKA AKSSSILENA YEDVKLFYTL GKELGRGQFG VTYLCTENST
101: GKKYACKSIS KKKLVTKADK DDMRREIQIM QHLSGQPNIV EFKGAYEDEK AVNLVMELCA GGELFDRIIA KGHYSERAAA SVCRQIVNVV KICHFMGVLH
201: RDLKPENFLL SSKDDKALIK ATDFGLSVFI EEGKVYRDIV GSAYYVAPEV LRRRYGKEVD IWSAGIILYI LLSGVPPFWA ETEKGIFDAI LEGHIDFESQ
301: PWPSISNSAK DLVRKMLTAD PKRRISAADV LEHPWLREGG EASDKPIDSA VLSRMKQFRA MNKLKKLALK VIAENINTEE IQGLKAMFAN IDTDNSGTIT
401: YEELKEGLAK LGSKLTEAEV KQLMDAADVD GNGSIDYIEF ITATMHRHRL ESDENLYKAF QHFDKDGSGY ITIDELEVAL KEYGMGDDAT IKEVLSDVDS
501: DNDGRINYEE FCAMMRSGNP QQQQQQQPRL F

Best Arabidopsis Sequence Match ( AT3G20410.1 )
(BLAST)

001: MGNCFAKNHG LMKPQQNGNT TRSVEVGVTN QDPPSYTPQA RTTQQPEKPG SVNSQPPPWR AAAAAPGLSP KTTTKSNSIL ENAFEDVKLF YTLGKELGRG
101: QFGVTYLCTE NSTGKKYACK SISKKKLVTK ADKDDMRREI QIMQHLSGQP NIVEFKGAYE DEKAVNLVME LCAGGELFDR IIAKGHYTER AAASVCRQIV
201: NVVKICHFMG VLHRDLKPEN FLLSSKDEKA LIKATDFGLS VFIEEGKVYR DIVGSAYYVA PEVLRRRYGK EVDIWSAGII LYILLSGVPP FWAETEKGIF
301: DAILEGHIDF ESQPWPSISS SAKDLVRRML TADPKRRISA ADVLQHPWLR EGGEASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENID TEEIQGLKAM
401: FANIDTDNSG TITYEELKEG LAKLGSKLTE AEVKQLMDAA DVDGNGSIDY IEFITATMHR HRLESNENLY KAFQHFDKDS SGYITIDELE SALKEYGMGD
501: DATIKEVLSD VDSDNDGRIN YEEFCAMMRS GNPQQQQPRL F

Arabidopsis Description

CPK9Calcium-dependent protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q38868]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.