CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23650.1	CDX73678	AT3G51920.1	17360592
AT4G23650.1	CDX95314	AT3G51920.1	17360592
AT4G23650.1	CDY23174	AT3G51920.1	17360592
AT4G23650.1	CDY06478	AT4G14640.1	17360592
AT4G23650.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013719.1-P	Field mustard	cytosol, plastid	99.62	99.62
CDY54853	Canola	plastid	97.9	97.9
CDY10955	Canola	cytosol	69.71	97.34
AT4G23650.1	Thale cress	plastid	91.05	90.36
CDY62741	Canola	endoplasmic reticulum, plasma membrane	94.1	80.33
TraesCS1D01G433400.1	Wheat	cytosol, golgi	67.62	77.17
TraesCS1A01G424200.1	Wheat	cytosol	67.62	77.17
TraesCS1B01G456700.1	Wheat	cytosol	67.43	76.96
KRH27875	Soybean	nucleus	73.9	76.83
HORVU1Hr1G092710.1	Barley	cytosol, plasma membrane	68.57	75.0
GSMUA_Achr6P31900_001	Banana	mitochondrion	62.29	75.0
VIT_02s0025g00690.t01	Wine grape	cytosol	74.1	73.67
KRH77599	Soybean	nucleus	74.1	73.67
KRH59992	Soybean	endoplasmic reticulum	72.19	73.17
Os01t0622600-01	Rice	plasma membrane	71.81	72.78
Solyc08g008170.2.1	Tomato	plastid	70.86	72.09
Zm00001d044185_P005	Maize	cytosol, mitochondrion	71.81	71.95
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	70.67	71.62
TraesCS3B01G254500.1	Wheat	golgi, unclear	70.67	71.62
TraesCS3A01G224900.1	Wheat	cytosol, mitochondrion	70.67	71.62
EES01094	Sorghum	cytosol, mitochondrion	71.43	71.43
PGSC0003DMT400014939	Potato	plastid	70.29	71.37
Zm00001d011392_P001	Maize	cytosol, plastid	71.62	70.94
GSMUA_Achr9P05370_001	Banana	cytosol	59.24	69.73
GSMUA_Achr1P05040_001	Banana	cytosol	62.29	68.99
GSMUA_Achr2P06360_001	Banana	plasma membrane	67.43	68.6
Zm00001d009708_P001	Maize	mitochondrion	70.1	68.27
Os05t0585500-01	Rice	plasma membrane	70.1	67.9
EES20022	Sorghum	cytosol, mitochondrion	69.71	67.65
CDY63783	Canola	cytosol	65.14	66.15
CDY44912	Canola	cytosol	64.95	65.96
CDX78468	Canola	cytosol	65.33	65.58
CDX97174	Canola	cytosol	65.14	65.52
CDX69700	Canola	cytosol	65.14	65.52
CDX70450	Canola	cytosol	64.95	65.2
CDX92536	Canola	cytosol	64.0	64.99
CDY13993	Canola	cytosol	63.81	64.8
CDX85697	Canola	cytosol	63.05	64.52
CDX91168	Canola	cytosol	63.43	63.67
HORVU3Hr1G055730.3	Barley	plastid	70.86	62.63
CDX97315	Canola	cytosol, plasma membrane	59.81	60.38
KRH41261	Soybean	cytosol	49.71	59.73
CDY47496	Canola	cytosol	54.48	59.71
CDY36037	Canola	nucleus, plasma membrane	60.19	59.51
CDX91224	Canola	cytosol	48.95	59.22
CDX82244	Canola	cytosol	60.19	59.18
CDY59100	Canola	cytosol	53.52	58.42
CDY54794	Canola	cytosol	53.52	58.42
CDX87164	Canola	cytosol	52.76	57.11
CDY07254	Canola	cytosol	59.05	57.09
CDY16860	Canola	cytosol	52.57	56.79
CDY37101	Canola	cytosol	53.71	56.74
CDY24863	Canola	cytosol	58.67	56.72
CDX73342	Canola	nucleus, plasma membrane	53.52	56.54
CDY40788	Canola	cytosol	52.0	56.41
CDY46963	Canola	cytosol	45.52	56.1
CDX80376	Canola	cytosol	52.38	56.01
CDX90725	Canola	cytosol	53.33	56.0
CDY05064	Canola	cytosol	53.33	56.0
CDY66815	Canola	cytosol, plastid	58.86	55.98
CDX73219	Canola	cytosol, mitochondrion	58.86	55.98
CDY46962	Canola	cytosol	49.33	55.94
CDY46964	Canola	cytosol	51.43	55.9
CDX82886	Canola	nucleus, plasma membrane	58.67	55.3
CDY40790	Canola	cytosol	48.57	55.19
CDX92440	Canola	cytosol	51.81	55.06
CDY16557	Canola	cytosol	51.05	55.03
CDY43077	Canola	cytosol	54.67	54.98
CDX79112	Canola	cytosol	58.67	54.71
CDY52603	Canola	cytosol	46.1	54.14
CDX69129	Canola	nucleus, plasma membrane	56.0	54.04
CDX87997	Canola	cytosol	55.43	53.99
CDY07866	Canola	cytosol	55.43	53.99
CDX75493	Canola	cytosol	56.0	53.95
CDY26800	Canola	cytosol	55.43	53.1
CDY40789	Canola	cytosol	51.81	52.92
CDY40426	Canola	cytosol	40.76	52.2
CDX72530	Canola	cytosol	49.52	52.0
CDX70192	Canola	cytosol, plastid	56.57	51.92
CDX80925	Canola	cytosol	56.57	51.83
CDX98791	Canola	cytosol, plastid	56.57	51.83
CDY11313	Canola	cytosol	56.95	50.85
CDY00963	Canola	plastid	55.24	50.52
CDY08584	Canola	cytosol	55.24	50.35
CDY14419	Canola	cytosol	52.38	50.0
CDY07688	Canola	cytosol	52.38	50.0
CDY00688	Canola	plastid	55.81	48.83
CDX73914	Canola	plastid	55.62	48.75
CDY32077	Canola	cytosol	41.9	42.47
CDX88038	Canola	cytosol	52.57	30.53
CDY00689	Canola	plastid	0.38	0.6
CDY00964	Canola	plastid	0.38	0.6

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	GO:A0A078HZS7	UniProt:A0A078HZS7
EnsemblPlants:CDY44125	ProteinID:CDY44125	ProteinID:CDY44125.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005509
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00079571001	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF182	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDDCFE	SEG:seg	:	:	:	:

Description

BnaA01g13330DBnaA01g13330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZS7]

Coordinates

chrLK032579:-:227920..230561

Molecular Weight (calculated)

58772.1 Da

IEP (calculated)

6.473

GRAVY (calculated)

-0.537

Length

525 amino acids

Sequence
(BLAST)

001: MGHRHSKSKT SSSSSSSDNV VHHVKPSGER RGSSGSGSGP VKSSSGSGTG GSRSQQNGRI LGKPMEDVKG TYDLGRELGR GQFGVTHLVT HKETKKVFAC
101: KSIPTRRLVQ SDDIEDVRRE VQIMHHLSGH RNIVDLKGAY EDRQSVNLIM ELCEGGELFD RIIAKGHYTE RAAADLCRQM VMVVHSCHSM GVMHRDLKPE
201: NFLFLSKDES SPLKATDFGL SVFFKPGDKF KDLVGSAYYV APEVLKRNYG PEADIWSAGV ILYILLSGVP PFWGENETGI FDAILEGKLD FSADPWPDVS
301: NGAKDLVKKM LTYDPKDRLT ASEVLNHPWI KEDGEASDKP LDNAVLSRMK QFRAMNKLKK MALKVIAENL SEEEIIGLKE MFKALDTDKN GIVTLEELRT
401: GLPKLGSKIS EAEIKQLMEA ADMDGDGSID YLEFISATMH MNRIEREDHL YTAFQYFDKD NSGYITMEEL EQAMKKYNMG DDKSIKEIIA EVDTDRDGKI
501: NYEEFVAMMK KGHPELVTNR RRVNM

Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)

001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM

Arabidopsis Description

CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.