Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| golgi:
25769308
unclear: 25769308 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G224900.1 | Wheat | cytosol, mitochondrion | 100.0 | 100.0 |
| TraesCS3D01G228700.1 | Wheat | cytosol, mitochondrion | 99.81 | 99.81 |
| TraesCS1B01G456700.1 | Wheat | cytosol | 80.12 | 90.22 |
| Os01t0622600-01 | Rice | plasma membrane | 89.96 | 89.96 |
| EES01094 | Sorghum | cytosol, mitochondrion | 89.77 | 88.57 |
| Zm00001d044185_P005 | Maize | cytosol, mitochondrion | 89.19 | 88.17 |
| Zm00001d011392_P001 | Maize | cytosol, plastid | 90.15 | 88.11 |
| HORVU3Hr1G055730.3 | Barley | plastid | 99.61 | 86.87 |
| GSMUA_Achr6P31900_001 | Banana | mitochondrion | 66.41 | 78.9 |
| CDY10955 | Canola | cytosol | 56.18 | 77.39 |
| Bra019282.1-P | Field mustard | cytosol | 55.98 | 77.13 |
| KRH27875 | Soybean | nucleus | 74.71 | 76.63 |
| GSMUA_Achr9P05370_001 | Banana | cytosol | 65.06 | 75.56 |
| KRH59992 | Soybean | endoplasmic reticulum | 75.1 | 75.1 |
| VIT_02s0025g00690.t01 | Wine grape | cytosol | 75.48 | 74.05 |
| GSMUA_Achr2P06360_001 | Banana | plasma membrane | 73.75 | 74.03 |
| GSMUA_Achr1P05040_001 | Banana | cytosol | 67.57 | 73.84 |
| KRH77599 | Soybean | nucleus | 74.71 | 73.3 |
| Solyc08g008170.2.1 | Tomato | plastid | 72.39 | 72.67 |
| PGSC0003DMT400014939 | Potato | plastid | 71.43 | 71.57 |
| AT4G23650.1 | Thale cress | plastid | 72.59 | 71.08 |
| Bra013719.1-P | Field mustard | cytosol, plastid | 71.81 | 70.86 |
| CDY44125 | Canola | cytosol, plastid | 71.62 | 70.67 |
| CDY54853 | Canola | plastid | 71.62 | 70.67 |
| Bra019281.1-P | Field mustard | plastid | 71.81 | 69.92 |
| Bra019284.1-P | Field mustard | plastid | 71.81 | 69.92 |
| TraesCS3B01G365200.1 | Wheat | cytosol | 62.74 | 62.74 |
| KRH41261 | Soybean | cytosol | 52.12 | 61.78 |
| TraesCS1B01G320400.1 | Wheat | cytosol, mitochondrion | 61.0 | 61.12 |
| TraesCS4B01G130300.1 | Wheat | cytosol | 62.74 | 61.09 |
| CDY62741 | Canola | endoplasmic reticulum, plasma membrane | 71.81 | 60.49 |
| TraesCS5B01G137600.1 | Wheat | cytosol | 62.36 | 59.93 |
| TraesCS2B01G248700.2 | Wheat | cytosol | 61.2 | 59.59 |
| TraesCS2B01G424900.1 | Wheat | cytosol | 56.18 | 54.19 |
| TraesCS6B01G288600.1 | Wheat | mitochondrion | 56.95 | 53.83 |
| TraesCS4B01G109800.2 | Wheat | plastid | 53.28 | 53.8 |
| TraesCS2B01G478100.1 | Wheat | cytosol, mitochondrion | 57.34 | 53.13 |
| TraesCS5B01G115400.1 | Wheat | cytosol | 53.67 | 52.55 |
| TraesCS2B01G269200.3 | Wheat | cytosol, plastid | 57.34 | 52.47 |
| TraesCS6B01G467300.1 | Wheat | cytosol | 56.37 | 51.41 |
| TraesCS5B01G428700.1 | Wheat | cytosol | 57.53 | 50.85 |
| TraesCS4B01G321800.1 | Wheat | cytosol | 51.16 | 48.36 |
| TraesCS5B01G428400.2 | Wheat | cytosol | 58.3 | 48.17 |
| TraesCS5B01G109300.1 | Wheat | plastid | 57.53 | 47.76 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR002048 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PFAM:PF13499 | ScanProsite:PS00018 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF182 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS3B01G254500 |
| EnsemblPlants:TraesCS3B01G254500.1 | TIGR:cd00051 | TIGR:cd05117 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3B:+:410040578..410044176
Molecular Weight (calculated)
58411.7 Da
IEP (calculated)
6.122
GRAVY (calculated)
-0.478
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNRTSRHRR AAADQPATAP PPTAQPKPQP PPKPQTAPAP APTPEAGQVA MGRVLGRPME DVRATYTFGR ELGRGQFGVT YLVTHKATGQ RFACKSIATR
101: KLVHRDDIED VQREVQIMHH LTGHRNIVEL RGAYEDRHSV NLIMELCEGG ELFDRIIARG HYSERAAALL CREMVSVVHS CHSMGVFHRD LKPENFLFLN
201: NKEDSPLKAT DFGLSVFFKH GEQFKDLVGS AYYVAPEVLK RHYGAEADIW SAGIILYILL SGVPPFWADN EDGIFEAVLL GHIDFSSDPW PSISNGAKDL
301: VKKMLRQDPK ERLTAAEILN HPWIREDGEA PDKPLDITVI SRMKQFRAMN KLKKVALKIV AENLSEEEIT GLKEMFRSLD TDNSGTITLE ELRSGLPKLG
401: TKISESEITQ LMEAADVDGN GTIDYSEFVS ATMHMNRLEK EDHILKAFEY FDKDHSGYIT VDELEEALKK YDMGDDKTIK DIIAEVDTDH DGRINYQEFV
501: AMMRNNSPEI VPNRRRMF
101: KLVHRDDIED VQREVQIMHH LTGHRNIVEL RGAYEDRHSV NLIMELCEGG ELFDRIIARG HYSERAAALL CREMVSVVHS CHSMGVFHRD LKPENFLFLN
201: NKEDSPLKAT DFGLSVFFKH GEQFKDLVGS AYYVAPEVLK RHYGAEADIW SAGIILYILL SGVPPFWADN EDGIFEAVLL GHIDFSSDPW PSISNGAKDL
301: VKKMLRQDPK ERLTAAEILN HPWIREDGEA PDKPLDITVI SRMKQFRAMN KLKKVALKIV AENLSEEEIT GLKEMFRSLD TDNSGTITLE ELRSGLPKLG
401: TKISESEITQ LMEAADVDGN GTIDYSEFVS ATMHMNRLEK EDHILKAFEY FDKDHSGYIT VDELEEALKK YDMGDDKTIK DIIAEVDTDH DGRINYQEFV
501: AMMRNNSPEI VPNRRRMF
001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM
Arabidopsis Description
CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.