Factsheet for VIT_02s0025g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23650.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT4G23650.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT4G23650.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT4G23650.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT4G23650.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT4G23650.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT4G23650.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27875	Soybean	nucleus	82.58	86.34
KRH59992	Soybean	endoplasmic reticulum	82.95	84.56
KRH77599	Soybean	nucleus	82.2	82.2
Solyc08g008170.2.1	Tomato	plastid	80.11	81.98
PGSC0003DMT400014939	Potato	plastid	79.55	81.24
GSMUA_Achr6P31900_001	Banana	mitochondrion	67.05	81.19
CDY10955	Canola	cytosol	57.2	80.32
Bra019282.1-P	Field mustard	cytosol	56.82	79.79
TraesCS1D01G433400.1	Wheat	cytosol, golgi	69.32	79.57
TraesCS1A01G424200.1	Wheat	cytosol	69.32	79.57
TraesCS1B01G456700.1	Wheat	cytosol	69.13	79.35
HORVU1Hr1G092710.1	Barley	cytosol, plasma membrane	71.4	78.54
Os01t0622600-01	Rice	plasma membrane	75.19	76.64
GSMUA_Achr9P05370_001	Banana	cytosol	64.39	76.23
TraesCS3A01G224900.1	Wheat	cytosol, mitochondrion	74.05	75.48
TraesCS3B01G254500.1	Wheat	golgi, unclear	74.05	75.48
TraesCS3D01G228700.1	Wheat	cytosol, mitochondrion	74.05	75.48
EES01094	Sorghum	cytosol, mitochondrion	74.81	75.24
GSMUA_Achr2P06360_001	Banana	plasma membrane	73.3	75.0
Zm00001d044185_P005	Maize	cytosol, mitochondrion	74.24	74.81
Zm00001d011392_P001	Maize	cytosol, plastid	74.62	74.34
Bra013719.1-P	Field mustard	cytosol, plastid	73.86	74.29
CDY54853	Canola	plastid	73.67	74.1
CDY44125	Canola	cytosol, plastid	73.67	74.1
Bra019281.1-P	Field mustard	plastid	74.43	73.87
Bra019284.1-P	Field mustard	plastid	74.43	73.87
AT4G23650.1	Thale cress	plastid	73.86	73.72
Zm00001d009708_P001	Maize	mitochondrion	75.0	73.47
EES20022	Sorghum	cytosol, mitochondrion	75.19	73.38
GSMUA_Achr1P05040_001	Banana	cytosol	65.72	73.21
Os05t0585500-01	Rice	plasma membrane	74.24	72.32
KRH41261	Soybean	cytosol	58.14	70.25
VIT_06s0009g03150.t01	Wine grape	cytosol	67.23	66.48
HORVU3Hr1G055730.3	Barley	plastid	73.86	65.66
VIT_10s0116g01800.t01	Wine grape	cytosol	63.64	65.37
VIT_18s0001g00990.t01	Wine grape	plastid	63.64	64.24
CDY62741	Canola	endoplasmic reticulum, plasma membrane	74.81	64.23
VIT_19s0090g00410.t01	Wine grape	cytosol	63.07	62.13
VIT_18s0072g01030.t01	Wine grape	cytosol, mitochondrion	56.25	60.74
VIT_07s0130g00130.t01	Wine grape	cytosol	54.55	57.95
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	58.71	54.48
VIT_08s0032g01220.t01	Wine grape	cytosol	57.2	52.07
VIT_08s0032g00780.t01	Wine grape	cytosol	55.3	51.41
VIT_03s0038g03960.t01	Wine grape	cytosol	57.77	50.5

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100265650	wikigene:100265650	MapMan:18.4.5.4	Gene3D:3.30.200.20
EMBL:AM459623	ProteinID:CAN61364	ProteinID:CAN61364.1	ProteinID:CCB58210	ProteinID:CCB58210.1	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	UniProt:F6HUP4	EMBL:FN596251	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777
InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100265650	wikigene:LOC100265650	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF182	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC68774	UniParc:UPI00015CD022	ArrayExpress:VIT_02s0025g00690
EnsemblPlantsGene:VIT_02s0025g00690	EnsemblPlants:VIT_02s0025g00690.t01	unigene:Vvi.11729	RefSeq:XP_002272270	RefSeq:XP_002272270.1	RefSeq:XP_010658560.1
RefSeq:XP_019071900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:734407..743496

Molecular Weight (calculated)

59435.1 Da

IEP (calculated)

6.702

GRAVY (calculated)

-0.459

Length

528 amino acids

Sequence
(BLAST)

001: MGNCNGLPSG DTQFQINAGR DGGVRPSSHA HSSNGLNVRP PSPSPPPPPR TAAPVVHRPL AGNGRVLGRP MEDVRQTYIF GRELGRGQFG VTYLVTHKET
101: KEQFACKSIA TRKLVNRDDI EDVRREVQIM HHLTGHRNIV ELKGAYEDRH SVNLVMELCA GGELFDRIIA KGHYSERAAA ALCRQIVTVV HNCHTMGVMH
201: RDLKPENFLF LSTAEDSPLK ATDFGLSVFF KPGDVFKDLV GSAYYVAPEV LRRSYGAEAD IWSAGVILFI LLSGVPPFWG ENEQSIFDTI LRGHIDFSSD
301: PWPSISNSAK DLVKKMLRAD PKERLTAIDV LNHPWMKEDG ASDKPIDIAV LTRVKQFRAM NKLKKVALKV IAENLSEEEI IGLKEMFKSM DTDNSGTITY
401: EELKNGLPKL GTKLSESEVR QLMEAADVDG NGTIDYIEFI SATMHMNRME REDHLYRAFE YFDKDKSGYI TMEELEHALK RYNMGDEKTI KEIIAEVDTD
501: HDGRINYEEF AAMMRKGNPD LITNRRRK

Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)

001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM

Arabidopsis Description

CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.