Factsheet for HORVU1Hr1G092710.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23650.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G23650.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G23650.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G23650.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G23650.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G23650.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G23650.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G23650.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G23650.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G23650.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G23650.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G23650.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G23650.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G23650.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G23650.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G23650.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G23650.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G23650.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G23650.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G23650.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G23650.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G23650.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G23650.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G23650.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G424200.1	Wheat	cytosol	95.83	100.0
TraesCS1D01G433400.1	Wheat	cytosol, golgi	95.62	99.78
TraesCS1B01G456700.1	Wheat	cytosol	95.21	99.35
Zm00001d009708_P001	Maize	mitochondrion	93.75	83.49
EES20022	Sorghum	cytosol, mitochondrion	92.92	82.44
Os05t0585500-01	Rice	plasma membrane	92.71	82.1
GSMUA_Achr6P31900_001	Banana	mitochondrion	71.88	79.13
Bra019282.1-P	Field mustard	cytosol	61.25	78.19
CDY10955	Canola	cytosol	61.04	77.93
GSMUA_Achr9P05370_001	Banana	cytosol	69.79	75.11
KRH27875	Soybean	nucleus	78.12	74.26
KRH59992	Soybean	endoplasmic reticulum	79.38	73.55
GSMUA_Achr2P06360_001	Banana	plasma membrane	77.92	72.48
HORVU3Hr1G055730.3	Barley	plastid	89.17	72.05
GSMUA_Achr1P05040_001	Banana	cytosol	71.04	71.94
VIT_02s0025g00690.t01	Wine grape	cytosol	78.54	71.4
KRH77599	Soybean	nucleus	77.71	70.64
Solyc08g008170.2.1	Tomato	plastid	75.62	70.35
PGSC0003DMT400014939	Potato	plastid	75.0	69.63
AT4G23650.1	Thale cress	plastid	76.04	69.0
Bra013719.1-P	Field mustard	cytosol, plastid	75.21	68.76
CDY54853	Canola	plastid	75.21	68.76
CDY44125	Canola	cytosol, plastid	75.0	68.57
Bra019281.1-P	Field mustard	plastid	75.42	68.05
Bra019284.1-P	Field mustard	plastid	75.42	68.05
KRH41261	Soybean	cytosol	54.58	59.95
HORVU5Hr1G044550.1	Barley	cytosol	67.29	59.59
CDY62741	Canola	endoplasmic reticulum, plasma membrane	75.42	58.86
HORVU0Hr1G032220.1	Barley	cytosol, plastid	63.96	58.37
HORVU1Hr1G068240.1	Barley	cytosol, plastid	63.96	58.37
HORVU4Hr1G026640.5	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	65.42	57.83
HORVU2Hr1G046660.1	Barley	cytosol	64.58	57.3
HORVU2Hr1G096270.5	Barley	plastid	58.96	55.17
HORVU3Hr1G079040.4	Barley	cytosol	63.96	54.92
HORVU4Hr1G019530.1	Barley	plastid	58.12	54.07
HORVU5Hr1G032550.3	Barley	cytosol	58.33	53.85
HORVU6Hr1G094990.2	Barley	cytosol, plastid	60.83	51.41
HORVU2Hr1G058530.2	Barley	cytosol, plastid	60.21	51.15
HORVU6Hr1G066470.15	Barley	cytosol	60.42	51.06
HORVU4Hr1G082790.1	Barley	cytosol	56.67	49.63
HORVU5Hr1G030810.1	Barley	cytosol	60.21	41.94

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	UniProt:A0A287GRM3	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:HORVU1Hr1G092710	EnsemblPlants:HORVU1Hr1G092710.1	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF13499	PIRSF:PIRSF000654	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF182	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B462F06	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:551377425..551382667

Molecular Weight (calculated)

54302.8 Da

IEP (calculated)

5.644

GRAVY (calculated)

-0.413

Length

480 amino acids

Sequence
(BLAST)

001: QQPPPQPALP PDVGRVLGRP MEDVRATYTF GRELGRGQFG VTYLATHKST GARYACKSIA ARKLARADDV EDARREVQIM HHLTGHRSIV ELRGAYEDRH
101: SVNLVMELCE GGELFDRIIA RGHYSERAAA TLCREVVSVV HSCHSMGVMH RDLKPENFLF LNKREDSPLK ATDFGLSVFF KPGEQFRDLV GSAYYVAPEV
201: LKRRYGAEAD IWSAGVILYI LLSGVPPFWA ENEEGIFDAV LKGHIDFSSD PWPSISNGAK DLVKRMLRQD PKERLTAAEI LNHPWIREDG EAPDKPLDIT
301: VISRMKQFRA MNKLKKVALK IVAESLSEEE IVGLREMFKS LDTDNSGTIT LDELRAGLPK LGTKITESEI RQLMEAADVD GNGTIDYVEF ISATMHMNRL
401: EKEDHIFKAF EYFDKDHSGY ITVDELEEAL KKYDMGDEAT IKDIIAEVDT DHDGKINYQE FVAMMKNNSP EIVPNRRRLF

Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)

001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM

Arabidopsis Description

CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.