Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • plastid 3
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G23650.1 KRG89812 AT2G41090.1 17360592
AT4G23650.1 KRG94975 AT2G41090.1 17360592
AT4G23650.1 KRH18664 AT2G41090.1 17360592
AT4G23650.1 KRG89812 AT2G41100.1 17360592
AT4G23650.1 KRG94975 AT2G41100.1 17360592
AT4G23650.1 KRH18664 AT2G41100.1 17360592
AT4G23650.1 KRH31638 AT4G14640.1 17360592
AT4G23650.1 KRH69070 AT4G14640.1 17360592
AT4G23650.1 KRG89812 AT5G21274.1 17360592
AT4G23650.1 KRG94975 AT5G21274.1 17360592
AT4G23650.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH77599 Soybean nucleus 96.63 92.42
KRH59992 Soybean endoplasmic reticulum 88.32 86.1
VIT_02s0025g00690.t01 Wine grape cytosol 86.34 82.58
GSMUA_Achr6P31900_001 Banana mitochondrion 70.89 82.11
CDY10955 Canola cytosol 60.4 81.12
Solyc08g008170.2.1 Tomato plastid 82.57 80.81
Bra019282.1-P Field mustard cytosol 60.0 80.59
PGSC0003DMT400014939 Potato plastid 82.18 80.27
TraesCS1A01G424200.1 Wheat cytosol 72.48 79.57
TraesCS1B01G456700.1 Wheat cytosol 72.48 79.57
TraesCS1D01G433400.1 Wheat cytosol, golgi 72.48 79.57
HORVU1Hr1G092710.1 Barley cytosol, plasma membrane 74.26 78.12
Os01t0622600-01 Rice plasma membrane 78.42 76.45
GSMUA_Achr9P05370_001 Banana cytosol 67.33 76.23
GSMUA_Achr2P06360_001 Banana plasma membrane 77.62 75.97
EES01094 Sorghum cytosol, mitochondrion 78.02 75.05
AT4G23650.1 Thale cress plastid 78.42 74.86
TraesCS3A01G224900.1 Wheat cytosol, mitochondrion 76.63 74.71
TraesCS3B01G254500.1 Wheat golgi, unclear 76.63 74.71
TraesCS3D01G228700.1 Wheat cytosol, mitochondrion 76.63 74.71
Bra019284.1-P Field mustard plastid 78.22 74.25
Bra019281.1-P Field mustard plastid 78.22 74.25
CDY54853 Canola plastid 77.03 74.1
Bra013719.1-P Field mustard cytosol, plastid 77.03 74.1
Zm00001d044185_P005 Maize cytosol, mitochondrion 76.83 74.05
CDY44125 Canola cytosol, plastid 76.83 73.9
Zm00001d011392_P001 Maize cytosol, plastid 77.43 73.77
Zm00001d009708_P001 Maize mitochondrion 77.82 72.91
GSMUA_Achr1P05040_001 Banana cytosol 68.32 72.78
EES20022 Sorghum cytosol, mitochondrion 77.62 72.46
Os05t0585500-01 Rice plasma membrane 76.83 71.59
KRH41261 Soybean cytosol 60.2 69.57
KRH50623 Soybean cytosol 71.29 66.54
KRG89696 Soybean cytosol, mitochondrion 71.88 66.48
KRH14593 Soybean cytosol 69.11 65.97
KRH73535 Soybean cytosol 68.71 65.84
HORVU3Hr1G055730.3 Barley plastid 76.83 65.32
CDY62741 Canola endoplasmic reticulum, plasma membrane 78.22 64.23
KRH73749 Soybean nucleus 66.93 64.02
KRH14398 Soybean cytosol, nucleus 67.52 63.27
KRH02072 Soybean endoplasmic reticulum, nucleus 66.34 62.27
KRH51083 Soybean endoplasmic reticulum 64.95 62.0
KRH46181 Soybean nucleus 66.34 60.8
KRG98764 Soybean cytosol 65.74 60.25
KRH17481 Soybean cytosol 62.77 59.03
KRG91803 Soybean mitochondrion 57.23 58.98
KRH34984 Soybean cytosol 57.43 58.94
KRH54032 Soybean cytosol 57.82 58.75
KRH63919 Soybean cytosol 57.43 58.47
KRH41022 Soybean plastid 57.62 57.28
KRH59698 Soybean plastid 57.43 57.2
KRH05995 Soybean cytosol 57.82 56.92
KRH74107 Soybean cytosol 61.39 56.47
KRH34983 Soybean cytosol 53.47 56.02
KRH05994 Soybean cytosol 58.61 55.22
KRH14008 Soybean cytosol 60.99 55.2
KRG90147 Soybean cytosol, plastid 62.77 54.75
KRH33395 Soybean endoplasmic reticulum, nucleus 62.18 54.04
KRH72128 Soybean plastid 58.61 50.43
KRH32931 Soybean plastid 58.42 49.58
KRH68038 Soybean cytosol 57.82 49.49
KRG96293 Soybean cytosol 57.43 48.9
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10EntrezGene:100817321MapMan:18.4.5.4Gene3D:3.30.200.20EMBL:ACUP02006735
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domEnsemblPlantsGene:GLYMA_11G020200GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515
GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777UniProt:I1LGB8
InterPro:IPR000719InterPro:IPR002048EnsemblPlants:KRH27875ProteinID:KRH27875ProteinID:KRH27875.1InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF182InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000233C84BSEG:seg
Description
hypothetical protein
Coordinates
chr11:+:1418719..1423487
Molecular Weight (calculated)
57134.2 Da
IEP (calculated)
6.801
GRAVY (calculated)
-0.506
Length
505 amino acids
Sequence
(BLAST)
001: MGNCNSEPSS QTQPHSDHHH HHPQPSNGIT VLPPNSKPSV GRVLGRPMED ARSTYTFGRE LGRGQFGVTY QVTHKHTKQQ FACKSIATRK LVHRDDLEDV
101: RREVQIMHHL TGHRNIVELK GAYEDRHSVN LIMELCGGGE LFDRIIAKGH YSERAAADLC RQIVTVVHDC HTMGVMHRDL KPENFLFLSK DENSPLKATD
201: FGLSVFFKPG DVFKDLVGSA YYVAPEVLRR SYGPGADIWS AGVILFILLS GVPPFWSEKE QGIFDAILRG HIDFASDPWP SISSSAKDLV KKMLRADPKQ
301: RLSAVEVLNH PWMREDGASD KPLDVAVLSR MKQFRAMNKL KKVALKVIAE NLSEEEIIGL KEMFKSMDTD NSGTITFEEL KAGLPKLGTK VSESEVRQLM
401: EAADVDGNGT IDYIEFITAT MHMNRMERED HLYKAFEYFD KDRSGYITVE ELESALKKYN MGDEKTIKEI IAEVDADNDG RINYDEFVAM MRKGNPDLVN
501: NRRRK
Best Arabidopsis Sequence Match ( AT4G23650.1 )
(BLAST)
001: MGHRHSKSKS SDPPPSSSSS SSGNVVHHVK PAGERRGSSG SGTVGSSGSG TGGSRSTTST QQNGRILGRP MEEVRRTYEF GRELGRGQFG VTYLVTHKET
101: KQQVACKSIP TRRLVHKDDI EDVRREVQIM HHLSGHRNIV DLKGAYEDRH SVNLIMELCE GGELFDRIIS KGLYSERAAA DLCRQMVMVV HSCHSMGVMH
201: RDLKPENFLF LSKDENSPLK ATDFGLSVFF KPGDKFKDLV GSAYYVAPEV LKRNYGPEAD IWSAGVILYI LLSGVPPFWG ENETGIFDAI LQGQLDFSAD
301: PWPALSDGAK DLVRKMLKYD PKDRLTAAEV LNHPWIREDG EASDKPLDNA VLSRMKQFRA MNKLKKMALK VIAENLSEEE IIGLKEMFKS LDTDNNGIVT
401: LEELRTGLPK LGSKISEAEI RQLMEAADMD GDGSIDYLEF ISATMHMNRI EREDHLYTAF QFFDNDNSGY ITMEELELAM KKYNMGDDKS IKEIIAEVDT
501: DRDGKINYEE FVAMMKKGNP ELVPNRRRM
Arabidopsis Description
CPK3CPK3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I3]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.