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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH50623 Soybean cytosol 95.6 96.49
KRH14593 Soybean cytosol 82.05 84.69
KRH73535 Soybean cytosol 81.14 84.06
VIT_06s0009g03150.t01 Wine grape cytosol 80.4 82.21
AT5G19360.1 Thale cress cytosol 76.74 80.11
CDY63783 Canola cytosol 75.64 79.88
Bra020035.1-P Field mustard cytosol 75.46 79.69
Os01t0808400-01 Rice plasma membrane 75.09 79.61
CDX70450 Canola cytosol 76.19 79.54
CDX69700 Canola cytosol 76.01 79.5
CDX97174 Canola cytosol 76.01 79.5
CDY44912 Canola cytosol 75.27 79.5
AT5G12180.1 Thale cress cytosol 76.74 79.36
CDX78468 Canola cytosol 76.01 79.35
PGSC0003DMT400024436 Potato cytosol 76.01 79.2
Bra008910.1-P Field mustard cytosol 75.64 79.12
CDY13993 Canola cytosol 74.91 79.11
Bra002231.1-P Field mustard cytosol 74.91 79.11
CDX92536 Canola cytosol 74.91 79.11
Solyc11g064900.1.1 Tomato cytosol 76.37 78.83
GSMUA_Achr10P... Banana cytosol 72.53 78.73
Bra006142.1-P Field mustard cytosol 75.09 78.39
GSMUA_Achr8P01680_001 Banana cytosol 71.79 78.09
EES19734 Sorghum plastid 74.91 77.61
Zm00001d010659_P001 Maize plastid 73.81 77.5
TraesCS3A01G334200.1 Wheat plastid 73.44 77.41
Zm00001d012552_P005 Maize plastid 73.44 77.12
TraesCS3D01G327700.3 Wheat plastid 73.26 76.92
Zm00001d043150_P002 Maize plastid 73.26 76.92
TraesCS3B01G365200.1 Wheat cytosol 72.71 76.64
EES01628 Sorghum cytosol 72.89 76.54
CDX85697 Canola cytosol 71.61 76.22
Bra023367.1-P Field mustard cytosol 71.61 76.22
GSMUA_Achr8P21660_001 Banana cytosol 65.93 75.95
GSMUA_Achr6P16000_001 Banana cytosol 68.5 75.71
TraesCS1D01G308800.1 Wheat plastid 71.43 75.44
TraesCS1B01G320400.1 Wheat cytosol, mitochondrion 71.43 75.44
TraesCS1A01G309400.2 Wheat cytosol, plastid 71.43 75.44
CDX91168 Canola cytosol 72.16 75.33
HORVU0Hr1G032220.1 Barley cytosol, plastid 69.78 72.43
HORVU1Hr1G068240.1 Barley cytosol, plastid 69.78 72.43
GSMUA_Achr5P27580_001 Banana cytosol 72.53 72.39
KRH27875 Soybean nucleus 66.48 71.88
TraesCS4D01G125500.1 Wheat cytosol 69.41 71.24
TraesCS4A01G187900.1 Wheat cytosol 69.41 71.24
TraesCS5B01G137600.1 Wheat cytosol 69.96 70.87
HORVU5Hr1G044550.1 Barley cytosol 70.33 70.85
TraesCS4B01G130300.1 Wheat cytosol 68.86 70.68
KRH59992 Soybean endoplasmic reticulum 66.3 69.88
TraesCS5D01G153800.1 Wheat cytosol 69.23 69.87
TraesCS5A01G138300.1 Wheat cytosol 69.23 69.87
Os11t0136600-00 Rice extracellular 68.68 69.32
EES07931 Sorghum cytosol 67.95 68.96
KRH77599 Soybean nucleus 66.3 68.56
HORVU3Hr1G079040.4 Barley cytosol 69.41 67.8
Zm00001d004998_P001 Maize cytosol 68.5 67.75
HORVU4Hr1G026640.5 Barley endoplasmic reticulum, mitochondrion, plasma membrane 66.67 67.03
Zm00001d052438_P001 Maize cytosol, plastid 67.22 66.85
EES16538 Sorghum cytosol 68.86 65.51
KRH73749 Soybean nucleus 59.52 61.55
KRH14398 Soybean cytosol, nucleus 59.71 60.48
KRH51083 Soybean endoplasmic reticulum 57.88 59.74
KRH02072 Soybean endoplasmic reticulum, nucleus 58.79 59.67
KRH63919 Soybean cytosol 53.85 59.27
KRH46181 Soybean nucleus 59.52 58.98
KRH41261 Soybean cytosol 47.07 58.81
KRG98764 Soybean cytosol 59.34 58.8
KRH54032 Soybean cytosol 53.48 58.75
KRG91803 Soybean mitochondrion 52.38 58.37
KRH34984 Soybean cytosol 52.56 58.33
KRH17481 Soybean cytosol 56.78 57.73
KRH41022 Soybean plastid 53.11 57.09
KRH59698 Soybean plastid 52.93 57.0
KRH34983 Soybean cytosol 49.45 56.02
KRH05995 Soybean cytosol 52.2 55.56
KRH74107 Soybean cytosol 54.95 54.64
KRH14008 Soybean cytosol 54.58 53.41
KRH05994 Soybean cytosol 52.38 53.36
KRG90147 Soybean cytosol, plastid 56.41 53.2
KRH33395 Soybean endoplasmic reticulum, nucleus 55.86 52.5
KRH72128 Soybean plastid 54.58 50.77
KRH32931 Soybean plastid 53.85 49.41
KRH68038 Soybean cytosol 52.01 48.14
KRG96293 Soybean cytosol 51.65 47.55
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10EntrezGene:100781355MapMan:18.4.5.4Gene3D:3.30.200.20EMBL:ACUP02012258
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domEnsemblPlantsGene:GLYMA_20G041500GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515
GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777UniProt:I1NDX2
InterPro:IPR000719InterPro:IPR002048EnsemblPlants:KRG89696ProteinID:KRG89696ProteinID:KRG89696.1InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF239InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000233DBB4SEG:seg
Description
hypothetical protein
Coordinates
chr20:+:7309720..7314984
Molecular Weight (calculated)
60882.3 Da
IEP (calculated)
5.521
GRAVY (calculated)
-0.561
Length
546 amino acids
Sequence
(BLAST)
001: MGNCCSQGNV ADGPADDSAA ANDKGEANQQ GSNNHANDNN DNSTNPTTAP TTTSKPPPTV TPPTSKPSKP AAMGPVLGRP MEDVRATYTI GKELGRGQFG
101: VTHLCTNKAT GQQFACKTIA KRKLVNKEDI EDVRREVQIM HHLSGQPNIV ELKGAYEDKQ SVHLVMELCA GGELFDRIIA KGHYTERAAA SLLRTIMQII
201: HTFHSMGVIH RDLKPENFLM LNKDENSPVK ATDFGLSVFF KEGETFKDIV GSAYYIAPEV LKRKYGPEVD IWSVGVMLYI LLSGVPPFWA ESEHGIFNAI
301: LRGHVDFTSD PWPSLSSAAK DLVRKMLTTD PKQRLTAQEV LNHPWIKEDG EAPDKPLDNA VLNRLKQFRA MNQFKKVALR VIAGCLSEEE IMGLKEMFRG
401: MDTDNSGTIT IEELKQGLAK QGTKLTEQEV KQLMEAADAD GNGTIDYDEF ITATMHMNRM NREEHLYTAF QYFDKDNSGF ITTEELEQAL REYNMHDGRD
501: IKEILQEVDG DNDGRINYDE FAAMMRKGNP EVMTKKRRDS LPLPLP
Best Arabidopsis Sequence Match ( AT5G12180.1 )
(BLAST)
001: MGNCCSHGRD SADNGDALEN GASASNAANS TGPTAEASVP QSKHAPPSPP PATKQGPIGP VLGRPMEDVK ASYSLGKELG RGQFGVTHLC TQKATGHQFA
101: CKTIAKRKLV NKEDIEDVRR EVQIMHHLTG QPNIVELKGA YEDKHSVHLV MELCAGGELF DRIIAKGHYS ERAAASLLRT IVQIVHTCHS MGVIHRDLKP
201: ENFLLLNKDE NSPLKATDFG LSVFYKPGEV FKDIVGSAYY IAPEVLKRKY GPEADIWSIG VMLYILLCGV PPFWAESENG IFNAILRGHV DFSSDPWPSI
301: SPQAKDLVKK MLNSDPKQRL TAAQVLNHPW IKEDGEAPDV PLDNAVMSRL KQFKAMNNFK KVALRVIAGC LSEEEIMGLK EMFKGMDTDS SGTITLEELR
401: QGLAKQGTRL SEYEVQQLME AADADGNGTI DYGEFIAATM HINRLDREEH LYSAFQHFDK DNSGYITMEE LEQALREFGM NDGRDIKEII SEVDGDNDGR
501: INYDEFVAMM RKGNPDPIPK KRRELSFK
Arabidopsis Description
CPK17CPK17 [Source:UniProtKB/TrEMBL;Acc:A0A178URQ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.