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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
endoplasmic reticulum: 27224218
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH51083 Soybean endoplasmic reticulum 91.82 93.38
VIT_10s0116g01800.t01 Wine grape cytosol 74.91 78.4
GSMUA_Achr6P29450_001 Banana cytosol 66.17 75.74
KRH73749 Soybean nucleus 73.05 74.43
KRH14398 Soybean cytosol, nucleus 74.35 74.21
Zm00001d021623_P001 Maize plasma membrane 72.49 73.45
KXG36322 Sorghum cytosol 72.49 73.45
Os07t0515100-01 Rice cytosol 72.49 73.17
Zm00001d006479_P005 Maize plasma membrane 71.93 72.88
Solyc03g031670.2.1 Tomato cytosol 74.91 72.88
TraesCS2A01G223100.2 Wheat cytosol 71.75 72.56
TraesCS2B01G248700.2 Wheat cytosol 71.75 72.56
KRH46181 Soybean nucleus 73.79 72.05
KRG98764 Soybean cytosol 73.05 71.32
Solyc02g032820.2.1 Tomato cytosol, plastid 56.69 71.1
HORVU2Hr1G046660.1 Barley cytosol 69.33 68.95
TraesCS2D01G229100.2 Wheat cytosol 69.33 68.95
KRH27875 Soybean nucleus 62.27 66.34
KRH59992 Soybean endoplasmic reticulum 62.27 64.67
KRH17481 Soybean cytosol 63.75 63.87
KRH77599 Soybean nucleus 61.71 62.88
KRH14593 Soybean cytosol 60.22 61.25
KRH05995 Soybean cytosol 58.18 61.01
KRH05994 Soybean cytosol 60.59 60.82
KRH73535 Soybean cytosol 59.48 60.72
KRH50623 Soybean cytosol 59.29 58.96
KRG89696 Soybean cytosol, mitochondrion 59.67 58.79
GSMUA_Achr2P13980_001 Banana plasma membrane 68.22 58.44
KRH63919 Soybean cytosol 53.72 58.27
KRH54032 Soybean cytosol 53.72 58.15
KRG91803 Soybean mitochondrion 52.79 57.96
KRH34984 Soybean cytosol 52.79 57.72
KRH41022 Soybean plastid 53.72 56.89
KRH59698 Soybean plastid 53.53 56.8
KRH41261 Soybean cytosol 45.72 56.29
KRH74107 Soybean cytosol 56.32 55.19
KRH14008 Soybean cytosol 55.76 53.76
KRH34983 Soybean cytosol 47.58 53.11
KRG90147 Soybean cytosol, plastid 54.28 50.43
KRH33395 Soybean endoplasmic reticulum, nucleus 53.9 49.91
KRH72128 Soybean plastid 52.6 48.21
KRH32931 Soybean plastid 52.97 47.9
KRH68038 Soybean cytosol 52.42 47.8
KRG96293 Soybean cytosol 51.3 46.54
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10EntrezGene:100812843MapMan:18.4.5.4Gene3D:3.30.200.20EMBL:ACUP02010293
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domEnsemblPlantsGene:GLYMA_17G013800GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515
GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777UniProt:I1MR60
InterPro:IPR000719InterPro:IPR002048EnsemblPlants:KRH02072ProteinID:KRH02072ProteinID:KRH02072.1InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF13499ScanProsite:PS00018ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF174InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054
SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00023D5EB1SEG:seg
Description
hypothetical protein
Coordinates
chr17:-:1047240..1051830
Molecular Weight (calculated)
59765.1 Da
IEP (calculated)
6.083
GRAVY (calculated)
-0.448
Length
538 amino acids
Sequence
(BLAST)
001: MGCQGSKEKK SKTEFTTSYG SAATGSGGGT SYNTVQPPPP PPPPTTTATT TNQVQTSAAP KPQSKASPTV QQKADTRILG KPFDDIKKYY SLGKELGRGQ
101: FGITYLCTDN ASGGTYACKS ILKRKLVSKA DREDMKREIQ IMQHLSGQPN IVEFKGAYED RFSVHLVMEL CAGGELFDRI IAQGHYSERA ASSLCRSIVN
201: VVHICHFMGV MHRDLKPENF LLSSKDDHAT LKATDFGLSV FIEQGKVYHD MVGSAYYVAP EVLRRSYGKE IDIWSAGIIL YILLSGVPPF WAETEKGIFN
301: AILEGEIDFV SEPWPSISDS AKDLVRKMLT QDPNKRITSS QVLEHPWMRE GGDASDKPID SAVLSRMKQF RAMNKLKKLA LKVIAENLSE EEIKGLKAMF
401: ANMDTDNSGT ITYEELKTGL ARIGSKLSEA EVKQLMDAAD VDGNGSIDYL EFISATMHRH RLERDEHLYK AFQYFDKDNS GYITRDELEI AMTQNGMGDE
501: ATIKEIISEV DADNDGRINY EEFCAMMRSG MPHQGQLL
Best Arabidopsis Sequence Match ( AT4G04720.1 )
(BLAST)
001: MGCFSSKHRK TQNDGGEKSI PINPVQTHVV PEHRKPQTPT PKPMTQPIHQ QISTPSSNPV SVRDPDTILG KPFEDIRKFY SLGKELGRGQ FGITYMCKEI
101: GTGNTYACKS ILKRKLISKQ DKEDVKREIQ IMQYLSGQPN IVEIKGAYED RQSIHLVMEL CAGGELFDRI IAQGHYSERA AAGIIRSIVN VVQICHFMGV
201: VHRDLKPENF LLSSKEENAM LKATDFGLSV FIEEGKVYRD IVGSAYYVAP EVLRRSYGKE IDIWSAGVIL YILLSGVPPF WAENEKGIFD EVIKGEIDFV
301: SEPWPSISES AKDLVRKMLT KDPKRRITAA QVLEHPWIKG GEAPDKPIDS AVLSRMKQFR AMNKLKKLAL KVIAESLSEE EIKGLKTMFA NIDTDKSGTI
401: TYEELKTGLT RLGSRLSETE VKQLMEAADV DGNGTIDYYE FISATMHRYK LDRDEHVYKA FQHFDKDNSG HITRDELESA MKEYGMGDEA SIKEVISEVD
501: TDNDGRINFE EFCAMMRSGS TQPQGKLLPF H
Arabidopsis Description
CPK21Calcium-dependent protein kinase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.