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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 plastid: 22908117
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_10s0116g01800.t01 Wine grape cytosol 73.89 61.67
Solyc03g031670.2.1 Tomato cytosol 79.25 61.48
TraesCS2B01G248700.2 Wheat cytosol 71.79 57.89
TraesCS2A01G223100.2 Wheat cytosol 71.79 57.89
Os07t0515100-01 Rice cytosol 71.79 57.79
KRH51083 Soybean endoplasmic reticulum 70.4 57.09
Zm00001d021623_P001 Maize plasma membrane 70.63 57.06
KXG36322 Sorghum cytosol 70.63 57.06
HORVU2Hr1G046660.1 Barley cytosol 71.79 56.93
TraesCS2D01G229100.2 Wheat cytosol 71.79 56.93
KRH02072 Soybean endoplasmic reticulum, nucleus 71.1 56.69
Zm00001d006479_P005 Maize plasma membrane 69.93 56.5
Solyc07g064610.2.1 Tomato nucleus 67.13 55.28
GSMUA_Achr6P29450_001 Banana cytosol 59.91 54.68
Solyc04g081910.2.1 Tomato cytosol, plastid 65.27 53.74
Solyc08g008170.2.1 Tomato plastid 58.74 48.84
Solyc01g008740.1.1 Tomato cytosol 59.21 46.95
Solyc11g064900.1.1 Tomato cytosol 57.58 46.69
Solyc12g099790.1.1 Tomato cytosol 58.04 46.54
Solyc06g065380.2.1 Tomato cytosol, plastid 54.55 46.15
GSMUA_Achr2P13980_001 Banana plasma membrane 66.43 45.38
Solyc04g049160.2.1 Tomato cytosol 53.61 45.28
Solyc05g056570.2.1 Tomato cytosol 52.91 45.13
Solyc01g112250.2.1 Tomato cytosol 55.71 44.76
Solyc11g018610.1.1 Tomato cytosol 52.68 44.75
Solyc10g081740.1.1 Tomato cytosol 50.12 43.09
Solyc10g074570.1.1 Tomato cytosol, plastid 55.48 42.73
Solyc10g076900.1.1 Tomato cytosol 47.55 40.72
Solyc11g006370.1.1 Tomato plastid 54.78 40.66
Solyc01g006730.2.1 Tomato cytosol 54.08 39.86
Solyc04g009800.2.1 Tomato cytosol, plastid 53.85 39.76
Solyc10g081640.1.1 Tomato cytosol 53.38 39.55
Solyc01g006840.2.1 Tomato cytosol 52.21 37.46
Solyc12g005040.1.1 Tomato cytosol 0.7 2.91
Protein Annotations
Gene3D:1.10.238.10Gene3D:1.10.510.10MapMan:18.4.5.4Gene3D:3.30.200.20ncoils:CoilInterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0004683GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005516
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009738GO:GO:0009931GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0018105GO:GO:0019538GO:GO:0035556GO:GO:0046777InterPro:IPR000719InterPro:IPR002048
UniProt:K4B5M6InterPro:Kinase-like_dom_sfPFAM:PF00036PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00018
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50222PANTHER:PTHR24349PANTHER:PTHR24349:SF177
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00054SMART:SM00220SUPFAM:SSF47473SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASEnsemblPlantsGene:Solyc02g032820.2EnsemblPlants:Solyc02g032820.2.1UniParc:UPI000276756ASEG:seg:
Description
No Description!
Coordinates
chr2:+:29362646..29370692
Molecular Weight (calculated)
48599.3 Da
IEP (calculated)
9.190
GRAVY (calculated)
-0.473
Length
429 amino acids
Sequence
(BLAST)
001: MGGCFSKNRY LEGDGKGTSN RPGRRRRGNT GVASYQHYKH PVYYHPRPTA QQRHAHQVTV KSSQPGTILG KPYENIRAHY TLGRELGRGQ YGVIYFCTEN
101: STRRNYACKS ILKRKLVSRK DTEDIKREIQ MMQHLSGQPN IVEFKGAYED HYSVHLVMEL CAGGELFDRI IARGYYSEKD AADIIRQIVN VVYICHFMGV
201: MHRDLKPENF LLTSKDEHTM IKATDFGLSV FIEQGKVYRD IVGSAYYVAP EVLRRSYGKE ADVWSAGVIL YILLSGVPPF WDETEKGIFH AILQGEIDFH
301: SDPWPSISNS AKDLVRKMLT QDAKSRITSA EVLEHPWLQS GEASDKPIDS AVLSRMKQFR AMNKLKKLAL KVIAENLSEE EIKGLKAMFA NMDTDNSGTI
401: TYEELKSGLA RLGSKLSEAE VKQLMEAVS
Best Arabidopsis Sequence Match ( AT1G50700.2 )
(BLAST)
001: MGNCLAKKYG LVMKPQQNGE RSVEIENRRR STHQDPSKIS TGTNQPPPWR NPAKHSGAAA ILEKPYEDVK LFYTLSKELG RGQFGVTYLC TEKSTGKRFA
101: CKSISKKKLV TKGDKEDMRR EIQIMQHLSG QPNIVEFKGA YEDEKAVNLV MELCAGGELF DRILAKGHYS ERAAASVCRQ IVNVVNICHF MGVMHRDLKP
201: ENFLLSSKDE KALIKATDFG LSVFIEEGRV YKDIVGSAYY VAPEVLKRRY GKEIDIWSAG IILYILLSGV PPFWAETEKG IFDAILEGEI DFESQPWPSI
301: SNSAKDLVRR MLTQDPKRRI SAAEVLKHPW LREGGEASDK PIDSAVLSRM KQFRAMNKLK KLALKVIAEN IDTEEIQGLK AMFANIDTDN SGTITYEELK
401: EGLAKLGSRL TEAEVKQLMD AVSFDQDKIV HLLLECLKTP IRVFVIQADV DGNGSIDYIE FITATMHRHR LESNENVYKA FQHFDKDGSG YITTDELEAA
501: LKEYGMGDDA TIKEILSDVD ADNDGRINYD EFCAMMRSGN PQQPRLF
Arabidopsis Description
CPK33calcium-dependent protein kinase 33 [Source:TAIR;Acc:AT1G50700]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.