CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73749	Soybean	nucleus	94.62	96.59
Solyc12g005040.1.1	Tomato	cytosol	15.77	82.52
KRH46181	Soybean	nucleus	82.0	80.22
KRG98764	Soybean	cytosol	82.0	80.22
VIT_19s0090g00410.t01	Wine grape	cytosol	79.04	79.48
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	73.47	77.8
CDY36037	Canola	nucleus, plasma membrane	76.44	77.59
Solyc07g064610.2.1	Tomato	nucleus	74.77	77.35
PGSC0003DMT400057484	Potato	cytosol	74.77	77.35
CDX82244	Canola	cytosol	76.62	77.34
Bra001789.1-P	Field mustard	cytosol	76.99	76.57
TraesCS2A01G223100.2	Wheat	cytosol	74.4	75.38
TraesCS2B01G248700.2	Wheat	cytosol	74.4	75.38
KRH51083	Soybean	endoplasmic reticulum	73.47	74.86
GSMUA_Achr6P29450_001	Banana	cytosol	65.12	74.68
Os07t0515100-01	Rice	cytosol	73.65	74.48
KRH02072	Soybean	endoplasmic reticulum, nucleus	74.21	74.35
Zm00001d006479_P005	Maize	plasma membrane	72.54	73.63
KXG36322	Sorghum	cytosol	72.54	73.63
Zm00001d021623_P001	Maize	plasma membrane	72.17	73.26
AT1G50700.2	Thale cress	cytosol	73.28	72.21
HORVU2Hr1G046660.1	Barley	cytosol	72.17	71.9
TraesCS2D01G229100.2	Wheat	cytosol	71.99	71.72
CDY43077	Canola	cytosol	65.68	67.82
KRH27875	Soybean	nucleus	63.27	67.52
KRH59992	Soybean	endoplasmic reticulum	63.82	66.41
KRH17481	Soybean	cytosol	64.56	64.8
KRH77599	Soybean	nucleus	63.27	64.58
KRH14593	Soybean	cytosol	60.48	61.63
KRH73535	Soybean	cytosol	60.11	61.48
KRH05995	Soybean	cytosol	58.26	61.21
KRH05994	Soybean	cytosol	60.48	60.82
KRH50623	Soybean	cytosol	60.67	60.44
KRG89696	Soybean	cytosol, mitochondrion	60.48	59.71
GSMUA_Achr2P13980_001	Banana	plasma membrane	69.39	59.55
KRH63919	Soybean	cytosol	53.43	58.06
KRH54032	Soybean	cytosol	53.06	57.55
KRH41261	Soybean	cytosol	46.38	57.21
KRG91803	Soybean	mitochondrion	51.58	56.73
KRH34984	Soybean	cytosol	51.76	56.71
KRH74107	Soybean	cytosol	56.22	55.19
KRH41022	Soybean	plastid	51.95	55.12
KRH59698	Soybean	plastid	51.76	55.03
KRH14008	Soybean	cytosol	56.4	54.48
KRH34983	Soybean	cytosol	47.87	53.53
KRG90147	Soybean	cytosol, plastid	55.47	51.64
KRH33395	Soybean	endoplasmic reticulum, nucleus	54.92	50.95
KRH72128	Soybean	plastid	53.43	49.06
KRH32931	Soybean	plastid	53.06	48.07
KRH68038	Soybean	cytosol	51.95	47.46
KRG96293	Soybean	cytosol	51.76	47.05

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100794852	MapMan:18.4.5.4	Gene3D:3.30.200.20	EMBL:ACUP02008501
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_14G023500	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	UniProt:I1M6R1
InterPro:IPR000719	InterPro:IPR002048	EnsemblPlants:KRH14398	ProteinID:KRH14398	ProteinID:KRH14398.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF177	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233BF8D	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:1669047..1673690

Molecular Weight (calculated)

60691.4 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.525

Length

539 amino acids

Sequence
(BLAST)

001: MGCCLSKKGS EPEEHIGYRH VAGAGGAGVY NNHKSHEPFA TQTKPPPHQP YQLPEKHAPP QAPWRPPPSP KHVHNHDTIT GKPFEDVKQH YTLGKELGRG
101: QFGVTYLCTE NSTGLQYACK SISRRKLVSR ADKEDMKREI QIMQHLSGQS NIVEFKGAFE DKQSVHVVME LCAGGELFDR IIAKGHYSER AAASICRQIV
201: KVVNTCHFMG VIHRDLKPEN FLLSSKDDKG LLKATDFGLS VFIEEGKVYR NIVGSAYYVA PEVLRRSYGK EADIWSAGVI LYILLSGVPP FWAETEKGIF
301: DAILQGHIDF ESSPWPSISN SAKDLVRKML IKDPKKRITA SQVLEHPWLK EGGNASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENLS EEEIQGLKAM
401: FTNIDTDNSG TITYEELRAG LQRLGSKLTE TEVRQLMDAA DVDGNGTIDY IEFITATMHR HRLERDEHLY KAFQYFDKDG SGYITRDELE IAMKEYGMGD
501: EATIREIISE VDTDNDGRIN YEEFCTMMRS GTQQQGKLF

Best Arabidopsis Sequence Match ( AT3G20410.1 )
(BLAST)

001: MGNCFAKNHG LMKPQQNGNT TRSVEVGVTN QDPPSYTPQA RTTQQPEKPG SVNSQPPPWR AAAAAPGLSP KTTTKSNSIL ENAFEDVKLF YTLGKELGRG
101: QFGVTYLCTE NSTGKKYACK SISKKKLVTK ADKDDMRREI QIMQHLSGQP NIVEFKGAYE DEKAVNLVME LCAGGELFDR IIAKGHYTER AAASVCRQIV
201: NVVKICHFMG VLHRDLKPEN FLLSSKDEKA LIKATDFGLS VFIEEGKVYR DIVGSAYYVA PEVLRRRYGK EVDIWSAGII LYILLSGVPP FWAETEKGIF
301: DAILEGHIDF ESQPWPSISS SAKDLVRRML TADPKRRISA ADVLQHPWLR EGGEASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENID TEEIQGLKAM
401: FANIDTDNSG TITYEELKEG LAKLGSKLTE AEVKQLMDAA DVDGNGSIDY IEFITATMHR HRLESNENLY KAFQHFDKDS SGYITIDELE SALKEYGMGD
501: DATIKEVLSD VDSDNDGRIN YEEFCAMMRS GNPQQQQPRL F

Arabidopsis Description

CPK9Calcium-dependent protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q38868]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.