Factsheet for VIT_19s0090g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0116g01800.t01	Wine grape	cytosol	77.61	80.93
KRH73749	Soybean	nucleus	78.36	79.55
KRH46181	Soybean	nucleus	81.53	79.31
KRH14398	Soybean	cytosol, nucleus	79.48	79.04
KRG98764	Soybean	cytosol	80.97	78.77
Solyc07g064610.2.1	Tomato	nucleus	76.31	78.5
PGSC0003DMT400057484	Potato	cytosol	76.31	78.5
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	74.07	78.0
Os07t0515100-01	Rice	cytosol	76.12	76.55
TraesCS2B01G248700.2	Wheat	cytosol	75.93	76.5
TraesCS2A01G223100.2	Wheat	cytosol	75.93	76.5
GSMUA_Achr6P29450_001	Banana	cytosol	66.42	75.74
Zm00001d021623_P001	Maize	plasma membrane	75.0	75.71
KXG36322	Sorghum	cytosol	75.0	75.71
Zm00001d006479_P005	Maize	plasma membrane	74.81	75.52
CDY36037	Canola	nucleus, plasma membrane	74.44	75.14
CDX82244	Canola	cytosol	74.44	74.72
Bra001789.1-P	Field mustard	cytosol	74.44	73.62
HORVU2Hr1G046660.1	Barley	cytosol	73.88	73.2
TraesCS2D01G229100.2	Wheat	cytosol	73.88	73.2
Solyc12g005040.1.1	Tomato	cytosol	13.99	72.82
AT1G50700.2	Thale cress	cytosol	72.57	71.12
CDY43077	Canola	cytosol	64.93	66.67
VIT_18s0001g00990.t01	Wine grape	plastid	64.18	65.77
VIT_02s0025g00690.t01	Wine grape	cytosol	62.13	63.07
VIT_06s0009g03150.t01	Wine grape	cytosol	61.75	61.98
GSMUA_Achr2P13980_001	Banana	plasma membrane	69.78	59.55
VIT_18s0072g01030.t01	Wine grape	cytosol, mitochondrion	53.54	58.69
VIT_07s0130g00130.t01	Wine grape	cytosol	53.17	57.34
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	56.16	52.9
VIT_03s0038g03960.t01	Wine grape	cytosol	56.72	50.33
VIT_08s0032g01220.t01	Wine grape	cytosol	54.29	50.17
VIT_08s0032g00780.t01	Wine grape	cytosol	51.31	48.42

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100243573	wikigene:100243573	MapMan:18.4.5.4	Gene3D:3.30.200.20
ProteinID:CCB50660	ProteinID:CCB50660.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
UniProt:F6HEK1	EMBL:FN595751	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100243573	wikigene:LOC100243573	PFAM:PF00069	PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF177	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TIGR:TC61052	UniParc:UPI00019854CA	ArrayExpress:VIT_19s0090g00410	EnsemblPlantsGene:VIT_19s0090g00410	EnsemblPlants:VIT_19s0090g00410.t01	unigene:Vvi.8495
RefSeq:XP_002278179	RefSeq:XP_002278179.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr19:+:6574181..6579103

Molecular Weight (calculated)

59769.7 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.371

Length

536 amino acids

Sequence
(BLAST)

001: MGICLSKGKR GSEPAYNGYG SGAVAGGVYD RIQERPAAVQ QPPHQLPEKR VPAAQPPMKP PTVALSPKPV HRPDTILGKS FEDVKLHYTI GKELGRGQFG
101: VTYLCTENST GLQYACKSIS KRKLVTKNDK EDIRREIQIM QDLSGQPNIV EFKGAYEDRL SVHLVMELCA GGELFDRIIA KGHYSERAAA SICRAIVNVV
201: HICHFMGVMH RDLKPENFLL SSKGENALLK ATDFGLSVFI EEGKVYRDIV GSAYYVAPEV LRRRYGKEID IWSAGVILYI LLSGVPPFWA ETEKGIFDAI
301: LQGHIDFETS PWPSISSSAK DLVRKMLTQD PQKRITSAQV LEHPWIKEDG EASDKPIDSA VLSRMKQFRA MNKLKKLALK VIAENLSEEE IQGLKAMFTN
401: MDTDKSGTIT YEELKSGLAR LGSKLTEAEV QQLMEAADVD GNGTIDYIEF ITATVNRHKL ERDEHLFKAF QYFDKDSSGF ITRDELKAAM KEHGMGDDDT
501: IAEIISEVDT DNDDKINYGE FCSMMRGGTQ QGLKVF

Best Arabidopsis Sequence Match ( AT3G20410.1 )
(BLAST)

001: MGNCFAKNHG LMKPQQNGNT TRSVEVGVTN QDPPSYTPQA RTTQQPEKPG SVNSQPPPWR AAAAAPGLSP KTTTKSNSIL ENAFEDVKLF YTLGKELGRG
101: QFGVTYLCTE NSTGKKYACK SISKKKLVTK ADKDDMRREI QIMQHLSGQP NIVEFKGAYE DEKAVNLVME LCAGGELFDR IIAKGHYTER AAASVCRQIV
201: NVVKICHFMG VLHRDLKPEN FLLSSKDEKA LIKATDFGLS VFIEEGKVYR DIVGSAYYVA PEVLRRRYGK EVDIWSAGII LYILLSGVPP FWAETEKGIF
301: DAILEGHIDF ESQPWPSISS SAKDLVRRML TADPKRRISA ADVLQHPWLR EGGEASDKPI DSAVLSRMKQ FRAMNKLKKL ALKVIAENID TEEIQGLKAM
401: FANIDTDNSG TITYEELKEG LAKLGSKLTE AEVKQLMDAA DVDGNGSIDY IEFITATMHR HRLESNENLY KAFQHFDKDS SGYITIDELE SALKEYGMGD
501: DATIKEVLSD VDSDNDGRIN YEEFCAMMRS GNPQQQQPRL F

Arabidopsis Description

CPK9Calcium-dependent protein kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q38868]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.