Factsheet for VIT_18s0001g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081910.2.1	Tomato	cytosol, plastid	72.85	73.13
Bra015796.1-P	Field mustard	cytosol, plastid	73.04	72.49
PGSC0003DMT400025581	Potato	cytosol	73.23	70.93
KRH17481	Soybean	cytosol	71.7	69.83
CDY66815	Canola	cytosol, plastid	73.04	69.2
CDX73219	Canola	cytosol, mitochondrion	72.47	68.66
AT1G76040.2	Thale cress	cytosol	73.04	68.09
VIT_10s0116g01800.t01	Wine grape	cytosol	66.16	67.32
HORVU2Hr1G096270.5	Barley	plastid	63.86	65.11
TraesCS2D01G404200.1	Wheat	cytosol	65.77	64.42
VIT_19s0090g00410.t01	Wine grape	cytosol	65.77	64.18
TraesCS2B01G424900.1	Wheat	cytosol	65.77	64.06
KRH05995	Soybean	cytosol	62.72	63.94
TraesCS2A01G407200.1	Wheat	cytosol	65.58	63.64
VIT_02s0025g00690.t01	Wine grape	cytosol	64.24	63.64
KRH05994	Soybean	cytosol	65.01	63.43
Os04t0560600-01	Rice	plasma membrane	63.86	62.66
EES12651	Sorghum	cytosol	63.86	62.66
VIT_18s0072g01030.t01	Wine grape	cytosol, mitochondrion	54.88	58.69
VIT_06s0009g03150.t01	Wine grape	cytosol	59.85	58.61
VIT_07s0130g00130.t01	Wine grape	cytosol	52.58	55.33
Zm00001d026139_P001	Maize	cytosol	62.72	55.31
VIT_13s0175g00080.t01	Wine grape	cytosol, plastid	55.64	51.14
VIT_08s0032g00780.t01	Wine grape	cytosol	53.35	49.12
VIT_08s0032g01220.t01	Wine grape	cytosol	54.3	48.97
VIT_03s0038g03960.t01	Wine grape	cytosol	55.45	48.01

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:100260943	wikigene:100260943	MapMan:18.4.5.4	Gene3D:3.30.200.20
EMBL:AM437552	ProteinID:CAN67210	ProteinID:CAN67210.1	ProteinID:CBI18922	ProteinID:CBI18922.3	UniProt:E0CQW8
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004683	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009719
GO:GO:0009738	GO:GO:0009931	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	GO:GO:0050832	GO:GO:1901002	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260943	wikigene:LOC100260943	PFAM:PF00069	PFAM:PF13499
ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222	PANTHER:PTHR24349
PANTHER:PTHR24349:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220	SUPFAM:SSF47473
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015C7F91	ArrayExpress:VIT_18s0001g00990	EnsemblPlantsGene:VIT_18s0001g00990	EnsemblPlants:VIT_18s0001g00990.t01
RefSeq:XP_002284750	RefSeq:XP_002284750.2	RefSeq:XP_003634354	RefSeq:XP_003634354.1	SEG:seg	:

Description

No Description!

Coordinates

chr18:-:1691089..1697199

Molecular Weight (calculated)

58957.5 Da

IEP (calculated)

5.095

GRAVY (calculated)

-0.418

Length

523 amino acids

Sequence
(BLAST)

001: MGFCFSRPRD IPISSSSSSD GDFTNHHYQP IPISSSKESL DIPPPLSMSV PKPPTSSQIG TVLGRPLCEI TSIYDIGKEL GRGQFGITYL CTEKSTGLKY
101: ACKSISKRKL KSGKDIEDVK REILILEHLT GQPNIVEFKG AYEDKQNLHL VMELCSGGEL FDRITAKGSY SEREAADICR QIVTVVHVCH FMGVMHRDLK
201: PENFLMVSRE ENSPLKATDF GLSVFIEDNE VYKDVVGSAY YVAPEVLRRS YGKEIDVWSA GVILYILLSG VPPFWGENEK SIFDAVLQGY VDFDSAPWPS
301: ISSSAKDLIK KMLMKDPKRR ITASDALNHP WLREDGEASD KPIDSAVLVR MKQFRAMNKL KKLALKVIAE NLSEEDIKGL KQMFNNMDTD RSGTITFEEL
401: KTGLSRLGSK LSELEIKQLM DAVDVDQNGT LDYTEFITAT MQRHRLEKEE NLFKAFQFFD KDGSGFITRE ELKQAMTQYG MGDEATIDEV IDDVDTDKDG
501: RINYEEFVAM MKKGPQDTEL KQR

Best Arabidopsis Sequence Match ( AT1G76040.2 )
(BLAST)

001: MLQNQHKTTK NQRNKNIGTK YFLRKKIMGF CFSKFGKSQT HEIPISSSSD SSPPHHYQPL PKPTVSQGQT SNPTSNPQPK PKPAPPPPPS TSSGSQIGPI
101: LNRPMIDLSA LYDLHKELGR GQFGITYKCT DKSNGREYAC KSISKRKLIR RKDIEDVRRE VMILQHLTGQ PNIVEFRGAY EDKDNLHLVM ELCSGGELFD
201: RIIKKGSYSE KEAANIFRQI VNVVHVCHFM GVVHRDLKPE NFLLVSNEED SPIKATDFGL SVFIEEGKVY RDIVGSAYYV APEVLHRNYG KEIDVWSAGV
301: MLYILLSGVP PFWGETEKTI FEAILEGKLD LETSPWPTIS ESAKDLIRKM LIRDPKKRIT AAEALEHPWM TDTKISDKPI NSAVLVRMKQ FRAMNKLKKL
401: ALKVIAENLS EEEIKGLKQT FKNMDTDESG TITFDELRNG LHRLGSKLTE SEIKQLMEAA DVDKSGTIDY IEFVTATMHR HRLEKEENLI EAFKYFDKDR
501: SGFITRDELK HSMTEYGMGD DATIDEVIND VDTDNDGRIN YEEFVAMMRK GTTDSDPKLI R

Arabidopsis Description

CPK29calcium-dependent protein kinase 29 [Source:TAIR;Acc:AT1G76040]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.