Factsheet for PGSC0003DMT400025581

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g081910.2.1	Tomato	cytosol, plastid	93.52	96.93
Bra015796.1-P	Field mustard	cytosol, plastid	71.67	73.43
VIT_18s0001g00990.t01	Wine grape	plastid	70.93	73.23
CDY66815	Canola	cytosol, plastid	71.67	70.11
CDX73219	Canola	cytosol, mitochondrion	71.11	69.57
AT1G76040.2	Thale cress	cytosol	71.85	69.16
KRH17481	Soybean	cytosol	68.33	68.72
PGSC0003DMT400071663	Potato	cytosol, plasma membrane	62.41	66.21
PGSC0003DMT400057484	Potato	cytosol	63.33	65.64
KRH05995	Soybean	cytosol	61.85	65.11
HORVU2Hr1G096270.5	Barley	plastid	61.3	64.52
TraesCS2D01G404200.1	Wheat	cytosol	63.52	64.23
EES12651	Sorghum	cytosol	63.33	64.17
TraesCS2B01G424900.1	Wheat	cytosol	63.52	63.87
KRH05994	Soybean	cytosol	63.15	63.62
TraesCS2A01G407200.1	Wheat	cytosol	63.33	63.45
Os04t0560600-01	Rice	plasma membrane	62.04	62.85
PGSC0003DMT400014939	Potato	plastid	57.04	59.57
PGSC0003DMT400067082	Potato	cytosol, plastid	52.96	57.09
PGSC0003DMT400024436	Potato	cytosol	55.37	57.06
PGSC0003DMT400011823	Potato	cytosol	56.48	57.01
PGSC0003DMT400060262	Potato	cytosol	52.59	56.46
Zm00001d026139_P001	Maize	cytosol	61.11	55.65
PGSC0003DMT400002331	Potato	cytosol	50.74	54.26
PGSC0003DMT400043320	Potato	cytosol, plastid	53.15	50.62
PGSC0003DMT400018575	Potato	cytosol	50.56	50.18
PGSC0003DMT400002592	Potato	plastid	52.78	49.31
PGSC0003DMT400054991	Potato	cytosol	52.59	48.8
PGSC0003DMT400065419	Potato	plastid	51.85	48.19
PGSC0003DMT400054983	Potato	cytosol	51.3	46.32
PGSC0003DMT400072554	Potato	cytosol	51.85	46.13
PGSC0003DMT400072292	Potato	cytosol, plastid	50.93	43.1

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	EntrezGene:102580468	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0050832	GO:GO:1901002	InterPro:IPR000719
InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M1ALN4	PFAM:PF00069	PFAM:PF13499	EnsemblPlantsGene:PGSC0003DMG400009883
PGSC:PGSC0003DMG400009883	EnsemblPlants:PGSC0003DMT400025581	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50222	PANTHER:PTHR24349	PANTHER:PTHR24349:SF89	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054
SMART:SM00220	SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029619F6	RefSeq:XP_006342079.1
SEG:seg	:	:	:	:	:

Description

Calcium-dependent protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009883]

Coordinates

chr4:+:71187506..71193127

Molecular Weight (calculated)

60964.0 Da

IEP (calculated)

5.253

GRAVY (calculated)

-0.439

Length

540 amino acids

Sequence
(BLAST)

001: MGLCFTKECC CPHYRDVPIS SSPEYHPIPV VSQKYPQESS PPPEQTPTPA PAPVPVPAST YMPTPRTSNF MSSTTQIGPI LGKPYVDIKT LYDLDKELGR
101: GQFGITYLCS DKSSGLKYAC KSISRRKLVT PKDIEDVRRE VTILQYLSGQ PNIVEFKGAY EDKNNLHLVM ELCCGGELFD RITAKGNYSE KEAARIGRQI
201: VNVVHVCHFM GVMHRDLKPE NFLMVSKDDD SPLKATDFGL SVFIEEGKIY KDIVGSAYYV APEVLRRKYG KEIDVWSAGV ILYILLSGFP PFWAETEKGI
301: FEEIVKGQLD FESSPWPSIS TSAKDLVRKM LTMDPKKRIT ADEALQHPWL MKDGEASDKP INSAVLTRLK QFRAMNKMKK LALKVIAENL SEDEIKGLKQ
401: MFNNMDTDGS GTITYDELKT GLSRLGSKLS ESEIKQLMDA ADVDNSGTID YIEFITATMH RHKLEREENL YKAFQFFDKD SSGFITRDEL RHAMEEYGMG
501: DEATIDEILD DVDTNKDGLI NYEEFAAMMR RGTVDEVKPR

Best Arabidopsis Sequence Match ( AT1G76040.2 )
(BLAST)

001: MLQNQHKTTK NQRNKNIGTK YFLRKKIMGF CFSKFGKSQT HEIPISSSSD SSPPHHYQPL PKPTVSQGQT SNPTSNPQPK PKPAPPPPPS TSSGSQIGPI
101: LNRPMIDLSA LYDLHKELGR GQFGITYKCT DKSNGREYAC KSISKRKLIR RKDIEDVRRE VMILQHLTGQ PNIVEFRGAY EDKDNLHLVM ELCSGGELFD
201: RIIKKGSYSE KEAANIFRQI VNVVHVCHFM GVVHRDLKPE NFLLVSNEED SPIKATDFGL SVFIEEGKVY RDIVGSAYYV APEVLHRNYG KEIDVWSAGV
301: MLYILLSGVP PFWGETEKTI FEAILEGKLD LETSPWPTIS ESAKDLIRKM LIRDPKKRIT AAEALEHPWM TDTKISDKPI NSAVLVRMKQ FRAMNKLKKL
401: ALKVIAENLS EEEIKGLKQT FKNMDTDESG TITFDELRNG LHRLGSKLTE SEIKQLMEAA DVDKSGTIDY IEFVTATMHR HRLEKEENLI EAFKYFDKDR
501: SGFITRDELK HSMTEYGMGD DATIDEVIND VDTDNDGRIN YEEFVAMMRK GTTDSDPKLI R

Arabidopsis Description

CPK29calcium-dependent protein kinase 29 [Source:TAIR;Acc:AT1G76040]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.