Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g065380.2.1 | Tomato | cytosol, plastid | 98.2 | 97.04 |
| PGSC0003DMT400002331 | Potato | cytosol | 87.82 | 87.13 |
| KRG91803 | Soybean | mitochondrion | 76.65 | 78.37 |
| CDX73342 | Canola | nucleus, plasma membrane | 77.64 | 78.27 |
| CDX90725 | Canola | cytosol | 78.04 | 78.2 |
| CDY05064 | Canola | cytosol | 78.04 | 78.2 |
| Bra034407.1-P | Field mustard | cytosol | 77.45 | 78.07 |
| CDY37101 | Canola | cytosol | 77.45 | 78.07 |
| KRH34984 | Soybean | cytosol | 76.65 | 78.05 |
| AT1G35670.1 | Thale cress | cytosol | 77.05 | 77.98 |
| VIT_18s0072g01030.t01 | Wine grape | cytosol, mitochondrion | 76.05 | 77.91 |
| AT4G09570.1 | Thale cress | cytosol | 77.64 | 77.64 |
| GSMUA_Achr9P08680_001 | Banana | cytosol | 73.05 | 77.54 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 76.05 | 75.6 |
| GSMUA_Achr2P08110_001 | Banana | cytosol, plastid | 74.65 | 75.56 |
| PGSC0003DMT400060262 | Potato | cytosol | 75.25 | 74.95 |
| GSMUA_Achr6P25560_001 | Banana | cytosol | 70.46 | 73.39 |
| Zm00001d004812_P002 | Maize | plastid | 74.05 | 72.75 |
| Zm00001d053016_P002 | Maize | cytosol, plastid | 73.65 | 72.64 |
| EES09373 | Sorghum | cytosol, plastid | 74.45 | 72.43 |
| Os11t0171500-01 | Rice | plasma membrane | 73.25 | 71.54 |
| TraesCS4B01G109800.2 | Wheat | plastid | 73.05 | 71.34 |
| TraesCS4A01G206200.2 | Wheat | golgi | 73.05 | 71.34 |
| TraesCS4D01G107200.1 | Wheat | plastid | 73.05 | 71.21 |
| HORVU4Hr1G019530.1 | Barley | plastid | 73.25 | 71.12 |
| EES16732 | Sorghum | cytosol | 72.85 | 70.87 |
| HORVU5Hr1G032550.3 | Barley | cytosol | 73.05 | 70.38 |
| Os12t0169800-00 | Rice | plasma membrane | 73.65 | 70.15 |
| KRH34983 | Soybean | cytosol | 67.47 | 70.12 |
| TraesCS5D01G122800.1 | Wheat | cytosol | 73.05 | 69.19 |
| TraesCS5B01G115400.1 | Wheat | cytosol | 72.65 | 68.81 |
| Zm00001d023560_P002 | Maize | cytosol | 52.3 | 67.18 |
| TraesCS5A01G107900.1 | Wheat | cytosol | 72.85 | 64.72 |
| PGSC0003DMT400043320 | Potato | cytosol, plastid | 67.07 | 59.26 |
| PGSC0003DMT400002592 | Potato | plastid | 66.07 | 57.27 |
| PGSC0003DMT400018575 | Potato | cytosol | 61.88 | 56.99 |
| PGSC0003DMT400065419 | Potato | plastid | 65.87 | 56.8 |
| PGSC0003DMT400071663 | Potato | cytosol, plasma membrane | 57.68 | 56.78 |
| PGSC0003DMT400014939 | Potato | plastid | 58.08 | 56.29 |
| PGSC0003DMT400057484 | Potato | cytosol | 57.48 | 55.28 |
| PGSC0003DMT400011823 | Potato | cytosol | 58.68 | 54.95 |
| PGSC0003DMT400054983 | Potato | cytosol | 65.27 | 54.68 |
| PGSC0003DMT400054991 | Potato | cytosol | 63.27 | 54.47 |
| PGSC0003DMT400024436 | Potato | cytosol | 56.89 | 54.39 |
| PGSC0003DMT400072554 | Potato | cytosol | 65.07 | 53.71 |
| PGSC0003DMT400025581 | Potato | cytosol | 57.09 | 52.96 |
| PGSC0003DMT400072292 | Potato | cytosol, plastid | 62.87 | 49.37 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.510.10 | EntrezGene:102594907 | MapMan:18.4.5.4 | Gene3D:3.30.200.20 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR002048 | InterPro:Kinase-like_dom_sf | UniProt:M1CGN1 | PFAM:PF00069 | PFAM:PF13499 | EnsemblPlantsGene:PGSC0003DMG400026077 |
| PGSC:PGSC0003DMG400026077 | EnsemblPlants:PGSC0003DMT400067082 | PIRSF:PIRSF000654 | ScanProsite:PS00018 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS50222 | PANTHER:PTHR24349 | PANTHER:PTHR24349:SF192 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00054 | SMART:SM00220 | SUPFAM:SSF47473 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000296ACC5 |
| RefSeq:XP_006353626.1 | RefSeq:XP_015166897.1 | SEG:seg | : | : | : |
Description
Calcium-dependent protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026077]
Coordinates
chr6:-:46477524..46481869
Molecular Weight (calculated)
56456.6 Da
IEP (calculated)
5.917
GRAVY (calculated)
-0.368
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQVVAKKRP PISSKPSPNV LPYQTPRLRE HYTLGKKLGQ GQFGTTYQCT EKVTGLQYAC KSIPKRKLLC REDYEDVWRE IQIMHHLSEH PNVVRIKGTY
101: EDNLFVHIVM ELCKGGELFD RIVQKGHYSE RQAAHLMKTI VKVVEACHSL GVMHRDLKPE NFLFDSSDED ATLKATDFGL SIFYKPGQYV SDVVGSPYYV
201: APEVLHKFYG PEIDVWSAGV ILYILLSGVP PFWAETDNGI FKQILKGKID FESEPWPHIS DSAKDLVKKM LDRDPKARIT AHEVLCHPWL VDDAAAPDKP
301: LGSAVLNRLK QFYDMNKLKK MALRVIAERL SEEEIGGLKQ LFKMIDTDSS GTITYEELKD GLKRVGSDLV ESDIKALMKA ADFDNSGTID YGEFIAATLH
401: LNKMEREENL LAAFSYFDKD GSGYITTDEL QQACVEFGLG DVKLDDIIKE IDIDNDGRID YGEFATMMKK GNTGFAARTM RGNLNFNLAD ALGASDSEKK
501: Q
101: EDNLFVHIVM ELCKGGELFD RIVQKGHYSE RQAAHLMKTI VKVVEACHSL GVMHRDLKPE NFLFDSSDED ATLKATDFGL SIFYKPGQYV SDVVGSPYYV
201: APEVLHKFYG PEIDVWSAGV ILYILLSGVP PFWAETDNGI FKQILKGKID FESEPWPHIS DSAKDLVKKM LDRDPKARIT AHEVLCHPWL VDDAAAPDKP
301: LGSAVLNRLK QFYDMNKLKK MALRVIAERL SEEEIGGLKQ LFKMIDTDSS GTITYEELKD GLKRVGSDLV ESDIKALMKA ADFDNSGTID YGEFIAATLH
401: LNKMEREENL LAAFSYFDKD GSGYITTDEL QQACVEFGLG DVKLDDIIKE IDIDNDGRID YGEFATMMKK GNTGFAARTM RGNLNFNLAD ALGASDSEKK
501: Q
001: MEKPNPRRPS NSVLPYETPR LRDHYLLGKK LGQGQFGTTY LCTEKSSSAN YACKSIPKRK LVCREDYEDV WREIQIMHHL SEHPNVVRIK GTYEDSVFVH
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
101: IVMEVCEGGE LFDRIVSKGC FSEREAAKLI KTILGVVEAC HSLGVMHRDL KPENFLFDSP SDDAKLKATD FGLSVFYKPG QYLYDVVGSP YYVAPEVLKK
201: CYGPEIDVWS AGVILYILLS GVPPFWAETE SGIFRQILQG KIDFKSDPWP TISEGAKDLI YKMLDRSPKK RISAHEALCH PWIVDEHAAP DKPLDPAVLS
301: RLKQFSQMNK IKKMALRVIA ERLSEEEIGG LKELFKMIDT DNSGTITFEE LKAGLKRVGS ELMESEIKSL MDAADIDNSG TIDYGEFLAA TLHINKMERE
401: ENLVVAFSYF DKDGSGYITI DELQQACTEF GLCDTPLDDM IKEIDLDNDG KIDFSEFTAM MKKGDGVGRS RTMRNNLNFN IAEAFGVEDT SSTAKSDDSP
501: K
Arabidopsis Description
CPK4Calcium-dependent protein kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q38869]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.