Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22313117
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g065490.2.1 | Tomato | nucleus | 71.01 | 76.5 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 29.14 | 57.18 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 42.31 | 48.25 |
| CDX94304 | Canola | nucleus | 27.09 | 42.33 |
| KRG98507 | Soybean | nucleus | 41.87 | 38.91 |
| CDY06563 | Canola | nucleus | 37.48 | 37.26 |
| KRH46360 | Soybean | nucleus | 39.68 | 36.62 |
| KRG98502 | Soybean | nucleus | 38.65 | 36.16 |
| KRH46364 | Soybean | nucleus | 42.46 | 35.94 |
| PGSC0003DMT400081181 | Potato | nucleus | 27.82 | 34.86 |
| AT4G26630.1 | Thale cress | nucleus | 38.36 | 34.34 |
| AT5G55660.1 | Thale cress | nucleus | 38.51 | 33.8 |
| Bra035582.1-P | Field mustard | nucleus | 38.65 | 33.25 |
| CDY28645 | Canola | nucleus | 38.36 | 33.04 |
| CDX89318 | Canola | nucleus | 33.97 | 32.95 |
| CDY20754 | Canola | nucleus | 37.48 | 32.24 |
| PGSC0003DMT400069255 | Potato | nucleus | 22.84 | 31.52 |
| CDY17352 | Canola | extracellular, vacuole | 37.92 | 31.28 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 38.8 | 30.64 |
| Bra026415.1-P | Field mustard | nucleus | 37.34 | 30.54 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 14.2 | 30.22 |
| Zm00001d033159_P001 | Maize | nucleus | 19.03 | 29.08 |
| EER91265 | Sorghum | nucleus | 27.38 | 28.99 |
| Zm00001d013757_P010 | Maize | nucleus | 27.38 | 28.64 |
| Os03t0596900-01 | Rice | nucleus | 27.23 | 26.46 |
| Bra010432.1-P | Field mustard | nucleus | 35.14 | 21.22 |
| CDX97358 | Canola | nucleus | 36.16 | 20.36 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 25.77 | 17.56 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 25.48 | 17.56 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 24.89 | 17.49 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 24.3 | 16.97 |
| OQU91413 | Sorghum | nucleus | 24.3 | 12.29 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400057390 | EnsemblPlantsGene:PGSC0003DMG400022282 | EntrezGene:102584719 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | PFAM:PF08766 | PGSC:PGSC0003DMG400022282 | RefSeq:XP_006346139.1 | SEG:seg |
| SUPFAM:SSF109715 | UniParc:UPI0002953546 | UniProt:M1C0Y3 | MapMan:35.2 | : | : |
Description
Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400022282]
Coordinates
chr7:+:55479720..55487590
Molecular Weight (calculated)
77236.8 Da
IEP (calculated)
4.761
GRAVY (calculated)
-1.571
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGETVSEV VEAPANGNVA VEDKSEAVTK DLHAEKDGTK EVKEEESDKN DAEKMDIDKE EAKETTGEEE VKENIEKEEV AKEDNEKEEA KENNGKEEEV
101: KETNETKEEK PDQEIEVEEE KPETKSEAME EEPDNKDEEM AEEPDNKDEE EEMAEEPDNK DDDEEMAEEP ENKDEDAREE GEKEDNKTNE KHKDEGGSKK
201: SVKSKGQKDN KRKREVAPKK EKEPKTPAPP TIDRPVRERK SVERLVASID REANKEFRIE KGRGTALKDI PNVAYKLSKK KTEDTFKLLH TILYGRRGKA
301: AQIKSNISRF SGFVWHENEE KQKMKVKEKL DKYIKEKLLE FCDVLDIPVT KATSRKEDMV VKLMDFLEAP HATTSELLAE KDQSSRGKKR RRESKKSPSS
401: ASASSKGSTK SGKKAETAQK AEKKKNVQES EDESEQEVDV HEEESEEEKT NGVPERSDDE KSDQAESEKE SESEDEPETE PEPEPEPEPE PEPEPKENKK
501: KHKRSSSKSS TKKEPAVKAK TKKPAVSKVP SPPKKTPSKS SKSSKHIAND DATPKASSKK KKTEVVKEKS STPKKSTPKE NTGKKIVKGK DKSKEDKLRP
601: SDDELRNAIC EILKEVDFNT ATFTDILKQL AKRFDTDLMP RKSSIKVMIQ DELTKLADEE DDEEDEGEAL KVAKKPSSKG VKA
101: KETNETKEEK PDQEIEVEEE KPETKSEAME EEPDNKDEEM AEEPDNKDEE EEMAEEPDNK DDDEEMAEEP ENKDEDAREE GEKEDNKTNE KHKDEGGSKK
201: SVKSKGQKDN KRKREVAPKK EKEPKTPAPP TIDRPVRERK SVERLVASID REANKEFRIE KGRGTALKDI PNVAYKLSKK KTEDTFKLLH TILYGRRGKA
301: AQIKSNISRF SGFVWHENEE KQKMKVKEKL DKYIKEKLLE FCDVLDIPVT KATSRKEDMV VKLMDFLEAP HATTSELLAE KDQSSRGKKR RRESKKSPSS
401: ASASSKGSTK SGKKAETAQK AEKKKNVQES EDESEQEVDV HEEESEEEKT NGVPERSDDE KSDQAESEKE SESEDEPETE PEPEPEPEPE PEPEPKENKK
501: KHKRSSSKSS TKKEPAVKAK TKKPAVSKVP SPPKKTPSKS SKSSKHIAND DATPKASSKK KKTEVVKEKS STPKKSTPKE NTGKKIVKGK DKSKEDKLRP
601: SDDELRNAIC EILKEVDFNT ATFTDILKQL AKRFDTDLMP RKSSIKVMIQ DELTKLADEE DDEEDEGEAL KVAKKPSSKG VKA
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.