Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g072660.2.1 | Tomato | nucleus | 74.75 | 70.48 |
| KRH41110 | Soybean | nucleus | 40.81 | 41.48 |
| PGSC0003DMT400081181 | Potato | nucleus | 45.66 | 41.47 |
| CDY39861 | Canola | nucleus | 27.88 | 38.23 |
| CDY05865 | Canola | plastid | 24.65 | 38.12 |
| CDY62886 | Canola | nucleus | 35.96 | 36.63 |
| Bra038644.1-P | Field mustard | nucleus | 36.16 | 36.53 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 41.82 | 36.32 |
| AT3G48710.1 | Thale cress | nucleus | 33.74 | 36.15 |
| KRH59791 | Soybean | nucleus | 38.18 | 35.93 |
| KRH54152 | Soybean | nucleus | 39.19 | 35.34 |
| KRH63796 | Soybean | nucleus | 38.18 | 35.33 |
| CDY37915 | Canola | nucleus | 30.1 | 35.22 |
| CDX77921 | Canola | nucleus | 30.3 | 35.21 |
| Bra019559.1-P | Field mustard | nucleus | 29.49 | 34.93 |
| CDY41517 | Canola | nucleus | 34.55 | 34.9 |
| AT5G63550.2 | Thale cress | nucleus | 37.17 | 34.65 |
| Bra035837.1-P | Field mustard | nucleus | 36.77 | 33.15 |
| CDY16716 | Canola | nucleus | 36.97 | 32.91 |
| CDX81185 | Canola | nucleus | 36.57 | 32.32 |
| Bra029213.1-P | Field mustard | nucleus | 18.38 | 32.27 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 29.9 | 31.69 |
| CDY69625 | Canola | nucleus | 18.59 | 31.51 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 22.02 | 31.32 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 30.3 | 30.49 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 29.9 | 30.08 |
| Os01t0924900-01 | Rice | nucleus | 30.91 | 30.06 |
| EES01993 | Sorghum | nucleus | 30.51 | 29.78 |
| GSMUA_Achr10P... | Banana | nucleus | 31.31 | 27.88 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 31.31 | 27.24 |
| GSMUA_Achr11P... | Banana | nucleus | 29.49 | 26.79 |
| Zm00001d042302_P002 | Maize | nucleus | 27.47 | 23.57 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 31.52 | 22.84 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400069255 | EnsemblPlantsGene:PGSC0003DMG401026940 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil | PANTHER:PTHR13468 |
| PFAM:PF08766 | PGSC:PGSC0003DMG401026940 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0002957AD8 | UniProt:M1CK67 |
| MapMan:35.2 | : | : | : | : | : |
Description
Protein DEK [Source:PGSC_GENE;Acc:PGSC0003DMG401026940]
Coordinates
chr6:-:53380799..53385914
Molecular Weight (calculated)
54881.2 Da
IEP (calculated)
4.982
GRAVY (calculated)
-1.320
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVKETLEE KKHEKESIEK EEKAKKSSEE EKESAEEMDV DKEDEKVKEE VVKKVEDGGV EKEEEGKSDD AISPKTPGSR PTRERKTVER YFESLIARGS
101: ATKPLSIEKA HNLKKNIGLF SGYVWVENEE RQRVKIKEKL DKCVKEKLLF FCDILNIPVS KSATKKACII NDELSVKLLD FLESPHSTTD SLLAEKEQKS
201: KKRKSKGKTS KSTGSLDKPA GKSAKKHQKP KLEEDETDEE PSSTRDESGA DNDDEEANEV GSDHEESGSE KEEEKNEEQE AEEEKPKKKK SNGNVSSKKD
301: SGNKVTEKPK AVKKDNPAKS PKSMTKSTKV SSSTASKRGA SGADSLVTPK KQKVEKKSQK EDNESVKENA SNKKKSTKTP AKVSEKEGKG ISGMKAKAEP
401: SNEEIHAAVV NILKEVDFNS ATLSDIIRNL GSHFGVDLMH RKIEVKAIIT DVINNMSDDE EGDDPEAEND EENNEGDDPK AENDEEKNEG DDSDA
101: ATKPLSIEKA HNLKKNIGLF SGYVWVENEE RQRVKIKEKL DKCVKEKLLF FCDILNIPVS KSATKKACII NDELSVKLLD FLESPHSTTD SLLAEKEQKS
201: KKRKSKGKTS KSTGSLDKPA GKSAKKHQKP KLEEDETDEE PSSTRDESGA DNDDEEANEV GSDHEESGSE KEEEKNEEQE AEEEKPKKKK SNGNVSSKKD
301: SGNKVTEKPK AVKKDNPAKS PKSMTKSTKV SSSTASKRGA SGADSLVTPK KQKVEKKSQK EDNESVKENA SNKKKSTKTP AKVSEKEGKG ISGMKAKAEP
401: SNEEIHAAVV NILKEVDFNS ATLSDIIRNL GSHFGVDLMH RKIEVKAIIT DVINNMSDDE EGDDPEAEND EENNEGDDPK AENDEEKNEG DDSDA
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.