Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 46.22 | 47.16 |
| Os01t0924900-01 | Rice | nucleus | 41.73 | 45.58 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 35.43 | 42.18 |
| EES01993 | Sorghum | nucleus | 37.95 | 41.62 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 36.69 | 41.46 |
| Bra029213.1-P | Field mustard | nucleus | 20.32 | 40.07 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 34.53 | 39.02 |
| KRH41110 | Soybean | nucleus | 34.17 | 39.01 |
| CDX77921 | Canola | nucleus | 29.5 | 38.5 |
| CDY37915 | Canola | nucleus | 28.96 | 38.06 |
| CDY39861 | Canola | nucleus | 24.46 | 37.67 |
| CDY69625 | Canola | nucleus | 19.78 | 37.67 |
| Bra019559.1-P | Field mustard | nucleus | 28.24 | 37.56 |
| AT3G48710.1 | Thale cress | nucleus | 30.94 | 37.23 |
| Solyc03g097490.2.1 | Tomato | nucleus | 35.79 | 36.99 |
| KRH59791 | Soybean | nucleus | 34.71 | 36.69 |
| KRH54152 | Soybean | nucleus | 35.61 | 36.07 |
| Zm00001d042302_P002 | Maize | nucleus | 37.41 | 36.05 |
| CDY05865 | Canola | plastid | 20.68 | 35.94 |
| PGSC0003DMT400081181 | Potato | nucleus | 34.89 | 35.6 |
| KRH63796 | Soybean | nucleus | 33.45 | 34.77 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 35.61 | 34.74 |
| Solyc06g072660.2.1 | Tomato | nucleus | 32.73 | 34.67 |
| Bra038644.1-P | Field mustard | nucleus | 30.22 | 34.29 |
| CDY62886 | Canola | nucleus | 29.68 | 33.95 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 34.53 | 33.74 |
| CDY41517 | Canola | nucleus | 29.14 | 33.06 |
| AT5G63550.2 | Thale cress | nucleus | 31.47 | 32.96 |
| PGSC0003DMT400069255 | Potato | nucleus | 27.88 | 31.31 |
| CDY16716 | Canola | nucleus | 31.3 | 31.3 |
| CDX81185 | Canola | nucleus | 31.47 | 31.25 |
| Bra035837.1-P | Field mustard | nucleus | 29.32 | 29.69 |
| GSMUA_Achr6P35030_001 | Banana | nucleus | 27.16 | 28.54 |
| GSMUA_Achr9P09240_001 | Banana | nucleus | 15.47 | 28.38 |
| GSMUA_Achr4P23560_001 | Banana | nucleus | 25.18 | 26.12 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 12.95 | 22.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P05790_001 | EnsemblPlants:GSMUA_Achr10T05790_001 | EnsemblPlantsGene:GSMUA_Achr10G05790_001 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI000295786B | UniProt:M0RFQ6 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative DEK C terminal domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G05790_001]
Coordinates
chr10:+:16247880..16256570
Molecular Weight (calculated)
61495.2 Da
IEP (calculated)
5.086
GRAVY (calculated)
-1.376
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAAAEETK KAGDGSPTGE AELEEEAGGN LPAVRAEAGE EESKEEEEQT EGGGDGPTEK VVVEKRKRGR RPRAEKSGDG EEGTPKKERK RRSVAREEAT
101: PVERPSRERK TVERFSEMAL PKAPVPKTPS FKQGSGDKLK DIPNVSFKLS KRKVDENLQA LHTVLFGRKS NARFLRRNIL QFSGFVWSEN EEKQRARIKE
201: KLDKYNKERL LDFCDLLDIH VVKPSTKKEE VILNLVEFLE SPCVTRDVVL TEKKGKRGRR TKGSTDATSG EGSSDRGSKK QRKGHKQSAE DENEDNDEGA
301: SVDTKEALND DDDDDEDDGN SQEENGHDNS EEEAEDGEQE ESAATNKRSA AKHTKKTSEP SKAKNKEINE QSSNASTKDK TTVRKDSAKV SKTASTSSPR
401: KSVPVDDSDS GHPSISKSKQ KGRRKGRASE KLPDNKENTS RKKSYKSDSN EKQGKVKASK AAKSGPSKEE LHAVVSDILK EVDFNTATLA DILRQLGAHF
501: KMDLMDRKAE VKRIIEDVIN SMSDDDDEDG EEDEGGAEDA KEEEDTKEDS DGDGDK
101: PVERPSRERK TVERFSEMAL PKAPVPKTPS FKQGSGDKLK DIPNVSFKLS KRKVDENLQA LHTVLFGRKS NARFLRRNIL QFSGFVWSEN EEKQRARIKE
201: KLDKYNKERL LDFCDLLDIH VVKPSTKKEE VILNLVEFLE SPCVTRDVVL TEKKGKRGRR TKGSTDATSG EGSSDRGSKK QRKGHKQSAE DENEDNDEGA
301: SVDTKEALND DDDDDEDDGN SQEENGHDNS EEEAEDGEQE ESAATNKRSA AKHTKKTSEP SKAKNKEINE QSSNASTKDK TTVRKDSAKV SKTASTSSPR
401: KSVPVDDSDS GHPSISKSKQ KGRRKGRASE KLPDNKENTS RKKSYKSDSN EKQGKVKASK AAKSGPSKEE LHAVVSDILK EVDFNTATLA DILRQLGAHF
501: KMDLMDRKAE VKRIIEDVIN SMSDDDDEDG EEDEGGAEDA KEEEDTKEDS DGDGDK
001: MATETLELKT PQLADTVAVT EKDTETKKKD EVEKDEAMEE KGEEIDGEKV KSPVTPVSER PIRERKRTGR YVIDTPPRSS GNKPLSITQG RGTRLKEIPN
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
Arabidopsis Description
At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.