Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41517 | Canola | nucleus | 83.88 | 83.88 |
| AT5G63550.2 | Thale cress | nucleus | 66.12 | 61.02 |
| Bra035837.1-P | Field mustard | nucleus | 67.76 | 60.47 |
| Bra029213.1-P | Field mustard | nucleus | 31.22 | 54.26 |
| Bra019559.1-P | Field mustard | nucleus | 42.04 | 49.28 |
| KRH41110 | Soybean | nucleus | 39.59 | 39.84 |
| Solyc03g097490.2.1 | Tomato | nucleus | 41.22 | 37.55 |
| Solyc06g072660.2.1 | Tomato | nucleus | 40.0 | 37.33 |
| PGSC0003DMT400081181 | Potato | nucleus | 40.61 | 36.51 |
| PGSC0003DMT400069255 | Potato | nucleus | 36.53 | 36.16 |
| KRH63796 | Soybean | nucleus | 39.39 | 36.07 |
| KRH59791 | Soybean | nucleus | 37.55 | 34.98 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 33.27 | 34.9 |
| KRH54152 | Soybean | nucleus | 38.16 | 34.06 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 39.59 | 34.04 |
| EES01993 | Sorghum | nucleus | 34.9 | 33.73 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 33.47 | 33.33 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 33.06 | 32.93 |
| Os01t0924900-01 | Rice | nucleus | 33.47 | 32.22 |
| GSMUA_Achr11P... | Banana | nucleus | 34.9 | 31.38 |
| GSMUA_Achr10P... | Banana | nucleus | 34.29 | 30.22 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 32.86 | 28.3 |
| Zm00001d042302_P002 | Maize | nucleus | 33.06 | 28.08 |
| Bra027748.1-P | Field mustard | nucleus | 10.0 | 27.84 |
| Bra035582.1-P | Field mustard | nucleus | 30.2 | 18.64 |
| Bra026415.1-P | Field mustard | nucleus | 29.18 | 17.13 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 29.39 | 16.65 |
| Bra010432.1-P | Field mustard | nucleus | 28.37 | 12.29 |
Protein Annotations
| EnsemblPlants:Bra038644.1 | EnsemblPlants:Bra038644.1-P | EnsemblPlantsGene:Bra038644 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI000253F2B8 | UniProt:M4FC28 | MapMan:35.2 |
Description
AT5G63550 (E=5e-108) | EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48710.1).
Coordinates
chrA06:+:14363135..14365840
Molecular Weight (calculated)
55286.1 Da
IEP (calculated)
6.055
GRAVY (calculated)
-1.404
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETLEGKR PGVESSPAKE KEVAERKNED ELEDIKSEEE KVETQRSRER PTRERKKVEL FSLSTPLRPT PAKSFSIEKG RGTLLRDIPN VAHQLSKRKA
101: DDNLILLHTI LYGKKAKAQM VKKNIGQFSG FVWLEKEEEK QRARVKEKLD KCIKDKLIFF CDVLDIPISR SSIKKEEVAA KVLDFLESPK ASRDVLLADR
201: EKQTKKRKST QKKRKSAASS DTPAKRKRQT KKQDHPSDTE EGKGEDDSDS EGTKDTHDED DAAPEEDSDH EKTEDEKDEA EDEKPSAKKI SSKKIKEDSS
301: AGTKGKDKQA SAKVSKKSGE KSSKRVANST SSPAKKQKVD HEESSKGKSK KQSVKPQANG SKNKGKGTKK GKVEPTREEM LEFVSKILKE VDFNTATLST
401: ILKKLSDHFG VDLSHRKPEV KEVIQDAINE MTDDEVEDED EKSEAGSDEE KEEEEKKAEA ESSKEKDEEE EKAEAESNKE KDEDEEKLKD
101: DDNLILLHTI LYGKKAKAQM VKKNIGQFSG FVWLEKEEEK QRARVKEKLD KCIKDKLIFF CDVLDIPISR SSIKKEEVAA KVLDFLESPK ASRDVLLADR
201: EKQTKKRKST QKKRKSAASS DTPAKRKRQT KKQDHPSDTE EGKGEDDSDS EGTKDTHDED DAAPEEDSDH EKTEDEKDEA EDEKPSAKKI SSKKIKEDSS
301: AGTKGKDKQA SAKVSKKSGE KSSKRVANST SSPAKKQKVD HEESSKGKSK KQSVKPQANG SKNKGKGTKK GKVEPTREEM LEFVSKILKE VDFNTATLST
401: ILKKLSDHFG VDLSHRKPEV KEVIQDAINE MTDDEVEDED EKSEAGSDEE KEEEEKKAEA ESSKEKDEEE EKAEAESNKE KDEDEEKLKD
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.