Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69625 | Canola | nucleus | 80.85 | 78.08 |
| Bra038644.1-P | Field mustard | nucleus | 54.26 | 31.22 |
| Bra035837.1-P | Field mustard | nucleus | 57.45 | 29.51 |
| Bra019559.1-P | Field mustard | nucleus | 42.55 | 28.71 |
| KRH41110 | Soybean | nucleus | 44.33 | 25.67 |
| KRH63796 | Soybean | nucleus | 46.45 | 24.49 |
| KRH54152 | Soybean | nucleus | 46.1 | 23.68 |
| KRH59791 | Soybean | nucleus | 43.97 | 23.57 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 46.45 | 22.98 |
| Solyc06g072660.2.1 | Tomato | nucleus | 41.49 | 22.29 |
| Solyc03g097490.2.1 | Tomato | nucleus | 41.49 | 21.75 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 35.82 | 21.63 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 36.88 | 21.14 |
| PGSC0003DMT400081181 | Potato | nucleus | 40.78 | 21.1 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 36.52 | 20.93 |
| GSMUA_Achr11P... | Banana | nucleus | 40.07 | 20.73 |
| GSMUA_Achr10P... | Banana | nucleus | 40.07 | 20.32 |
| Os01t0924900-01 | Rice | nucleus | 36.17 | 20.04 |
| EES01993 | Sorghum | nucleus | 35.82 | 19.92 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 37.23 | 18.45 |
| PGSC0003DMT400069255 | Potato | nucleus | 32.27 | 18.38 |
| Zm00001d042302_P002 | Maize | nucleus | 35.11 | 17.16 |
| Bra035582.1-P | Field mustard | nucleus | 37.59 | 13.35 |
| Bra026415.1-P | Field mustard | nucleus | 34.75 | 11.74 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 33.33 | 10.87 |
| Bra010432.1-P | Field mustard | nucleus | 32.62 | 8.13 |
| Bra027748.1-P | Field mustard | nucleus | 3.9 | 6.25 |
Protein Annotations
Description
AT5G63550 (E=1e-069) | EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48710.1); Has 115795 Blast hits to 50006 proteins in 1760 species: Archae - 230; Bacteria - 10317; Metazoa - 57515; Fungi - 12631; Plants - 4292; Viruses - 1075; Other Eukaryotes - 29735 (source: NCBI BLink).
Coordinates
chrA02:+:26511344..26513313
Molecular Weight (calculated)
31754.9 Da
IEP (calculated)
4.963
GRAVY (calculated)
-1.186
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETLEETT TPEVKSPAKD EIGAGDGPKE REEDEDGSKG GKLEDKDEEE GSVSKNSSVT QSSSERPTRE RKKVERFSLP SPTRAIPNKS VSIEKGLGTP
101: LREIPNVAHQ LSKRKADGNL ILLHTILYGK KAKAQMIKKN ISQFSGFVWS EEEEEKQRAK VKEKLDKCIK EKLIFFCDVL DIPINRSHIK KVKVAFKVLE
201: FLESPKATRD VILADQEKRK RQAKKGDHPS DKEVGKDEGD SDSEDSKDTH EEDATAPEEE DSDHEKTETE EERVEAEDEK KP
101: LREIPNVAHQ LSKRKADGNL ILLHTILYGK KAKAQMIKKN ISQFSGFVWS EEEEEKQRAK VKEKLDKCIK EKLIFFCDVL DIPINRSHIK KVKVAFKVLE
201: FLESPKATRD VILADQEKRK RQAKKGDHPS DKEVGKDEGD SDSEDSKDTH EEDATAPEEE DSDHEKTETE EERVEAEDEK KP
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKAKKRKSTP KRGKSGESSD TPAKRKRQTK KRDLPSDTEE GKDEGDADSE
301: GTNDPHEEDD AAPEEESDHE KTDTDDEKDE VEVEKPSKKK SSSKKTVEES SGSKGKDKQP SAKGSARSGE KSSKQIAKST SSPAKKQKVD HVESSKEKSK
401: KQPSKPQAKG SKEKGKATKK GKAKAEPTRK EMLEVVSKIL KEVDFNTATL SDILQKLSDH FGVELSHRKP EVKDVITEAI NAMTDDEEED EEEEAEAGSD
501: KEKEEVKGEE EEEKAEAESD KEKEKEEPKD
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKAKKRKSTP KRGKSGESSD TPAKRKRQTK KRDLPSDTEE GKDEGDADSE
301: GTNDPHEEDD AAPEEESDHE KTDTDDEKDE VEVEKPSKKK SSSKKTVEES SGSKGKDKQP SAKGSARSGE KSSKQIAKST SSPAKKQKVD HVESSKEKSK
401: KQPSKPQAKG SKEKGKATKK GKAKAEPTRK EMLEVVSKIL KEVDFNTATL SDILQKLSDH FGVELSHRKP EVKDVITEAI NAMTDDEEED EEEEAEAGSD
501: KEKEEVKGEE EEEKAEAESD KEKEKEEPKD
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.