Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g097490.2.1 | Tomato | nucleus | 72.66 | 73.61 |
| KRH63796 | Soybean | nucleus | 44.95 | 45.79 |
| PGSC0003DMT400069255 | Potato | nucleus | 41.47 | 45.66 |
| KRH41110 | Soybean | nucleus | 40.73 | 45.59 |
| AT3G48710.1 | Thale cress | nucleus | 36.88 | 43.51 |
| KRH54152 | Soybean | nucleus | 43.3 | 42.99 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 44.59 | 42.63 |
| Bra019559.1-P | Field mustard | nucleus | 32.29 | 42.11 |
| CDY37915 | Canola | nucleus | 32.48 | 41.84 |
| CDY39861 | Canola | nucleus | 27.71 | 41.83 |
| KRH59791 | Soybean | nucleus | 40.37 | 41.83 |
| CDX77921 | Canola | nucleus | 32.66 | 41.78 |
| CDY69625 | Canola | nucleus | 22.2 | 41.44 |
| Bra029213.1-P | Field mustard | nucleus | 21.1 | 40.78 |
| Bra038644.1-P | Field mustard | nucleus | 36.51 | 40.61 |
| CDY62886 | Canola | nucleus | 36.15 | 40.53 |
| CDY41517 | Canola | nucleus | 36.33 | 40.41 |
| AT5G63550.2 | Thale cress | nucleus | 38.35 | 39.36 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 33.21 | 38.76 |
| EES01993 | Sorghum | nucleus | 35.78 | 38.46 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 34.5 | 38.21 |
| Os01t0924900-01 | Rice | nucleus | 35.6 | 38.11 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 34.31 | 38.01 |
| CDX81185 | Canola | nucleus | 38.72 | 37.68 |
| Bra035837.1-P | Field mustard | nucleus | 37.61 | 37.34 |
| GSMUA_Achr11P... | Banana | nucleus | 37.06 | 37.06 |
| CDY05865 | Canola | plastid | 21.65 | 36.88 |
| CDY16716 | Canola | nucleus | 36.88 | 36.15 |
| GSMUA_Achr10P... | Banana | nucleus | 35.6 | 34.89 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 21.28 | 33.33 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 34.5 | 33.04 |
| Zm00001d042302_P002 | Maize | nucleus | 31.38 | 29.64 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 34.86 | 27.82 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400081181 | EnsemblPlantsGene:PGSC0003DMG400031730 | EntrezGene:102597735 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PFAM:PF08766 | PGSC:PGSC0003DMG400031730 | RefSeq:XP_006347625.1 | SEG:seg | SUPFAM:SSF109715 |
| UniParc:UPI000296B4B6 | UniProt:M1D4C1 | MapMan:35.2 | : | : | : |
Description
Protein DEK [Source:PGSC_GENE;Acc:PGSC0003DMG400031730]
Coordinates
chr3:-:46133226..46139042
Molecular Weight (calculated)
60405.4 Da
IEP (calculated)
5.260
GRAVY (calculated)
-1.385
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEKETLDY KKPEGVIEEQ QAKAKEKEKK EESSIQGQEV EEVDEMQVDK KDAESEEEEE KEEEKPVKKG KSRGESTEEP VTPITRPTRE RKTVERYSES
101: SDARGSTPKP LSIRKGSGTQ LKDIPNVAYK LSKRKPDDNL QILHNILFGK KSKVHSLKKN IGQFSGFVWV ENEEKERRKT KEKLDKCVKE KLLDFCDVLN
201: IPVSRTSAKK DELSVKLLEF LESPHSTTDS LLAEKEQKGK KQKRKSSASK SAGSLDKSVK KHQKSEVGVK RKRSAKTEEE EADDEQPSDS GDDSENDDEA
301: PKEGSDQEES GSEKGEKQEE EEVEEEVEEK PKKNKSNEKI NSKKNVKKDS GSKAAEKTKA TEKGSSAKSL KSSSKSTPSS SVSKKGASAA DSTSKAKKEK
401: AEKKSKKEET ESVKENSSSK KQSSKSTSKV SEKGKGKSVK KAKAEPSKEE LHAVVSIILK KVDFNTATLS DIIRQLGSHF DLDLMHRKAE VKAIITEVIN
501: SMSEEEEDED EPEGDDAETS EGDADAEKPE GDDDAEKSDG ADSDA
101: SDARGSTPKP LSIRKGSGTQ LKDIPNVAYK LSKRKPDDNL QILHNILFGK KSKVHSLKKN IGQFSGFVWV ENEEKERRKT KEKLDKCVKE KLLDFCDVLN
201: IPVSRTSAKK DELSVKLLEF LESPHSTTDS LLAEKEQKGK KQKRKSSASK SAGSLDKSVK KHQKSEVGVK RKRSAKTEEE EADDEQPSDS GDDSENDDEA
301: PKEGSDQEES GSEKGEKQEE EEVEEEVEEK PKKNKSNEKI NSKKNVKKDS GSKAAEKTKA TEKGSSAKSL KSSSKSTPSS SVSKKGASAA DSTSKAKKEK
401: AEKKSKKEET ESVKENSSSK KQSSKSTSKV SEKGKGKSVK KAKAEPSKEE LHAVVSIILK KVDFNTATLS DIIRQLGSHF DLDLMHRKAE VKAIITEVIN
501: SMSEEEEDED EPEGDDAETS EGDADAEKPE GDDDAEKSDG ADSDA
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.