Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035837.1-P | Field mustard | nucleus | 81.12 | 82.15 |
| CDX81185 | Canola | nucleus | 78.96 | 78.39 |
| CDY39861 | Canola | nucleus | 44.06 | 67.87 |
| CDY62886 | Canola | nucleus | 58.99 | 67.49 |
| CDY41517 | Canola | nucleus | 58.63 | 66.53 |
| AT5G63550.2 | Thale cress | nucleus | 63.49 | 66.48 |
| CDY69625 | Canola | nucleus | 31.12 | 59.25 |
| CDX77921 | Canola | nucleus | 41.19 | 53.76 |
| CDY37915 | Canola | nucleus | 39.93 | 52.48 |
| CDY05865 | Canola | plastid | 26.98 | 46.88 |
| KRH41110 | Soybean | nucleus | 34.35 | 39.22 |
| KRH63796 | Soybean | nucleus | 36.87 | 38.32 |
| Solyc06g072660.2.1 | Tomato | nucleus | 35.79 | 37.9 |
| KRH54152 | Soybean | nucleus | 36.69 | 37.16 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 37.95 | 37.02 |
| PGSC0003DMT400069255 | Potato | nucleus | 32.91 | 36.97 |
| PGSC0003DMT400081181 | Potato | nucleus | 36.15 | 36.88 |
| Solyc03g097490.2.1 | Tomato | nucleus | 35.61 | 36.8 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 29.86 | 35.55 |
| KRH59791 | Soybean | nucleus | 33.45 | 35.36 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 30.04 | 33.94 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 29.86 | 33.74 |
| EES01993 | Sorghum | nucleus | 29.86 | 32.74 |
| Os01t0924900-01 | Rice | nucleus | 29.68 | 32.42 |
| GSMUA_Achr10P... | Banana | nucleus | 31.3 | 31.3 |
| GSMUA_Achr11P... | Banana | nucleus | 30.58 | 31.19 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 29.68 | 29.0 |
| Zm00001d042302_P002 | Maize | nucleus | 27.7 | 26.69 |
| CDX94304 | Canola | nucleus | 19.06 | 24.26 |
| CDY06563 | Canola | nucleus | 26.62 | 21.54 |
| CDX89318 | Canola | nucleus | 24.64 | 19.46 |
| CDY20754 | Canola | nucleus | 27.52 | 19.27 |
| CDY28645 | Canola | nucleus | 26.08 | 18.29 |
| CDY17352 | Canola | extracellular, vacuole | 26.8 | 18.0 |
| CDX97358 | Canola | nucleus | 25.18 | 11.54 |
Protein Annotations
| EnsemblPlants:CDY16716 | EnsemblPlantsGene:GSBRNA2T00094581001 | Gene3D:1.10.10.60 | GO:A0A078FUQ6 | InterPro:DEK_C | ncoils:Coil |
| PFAM:PF08766 | ProteinID:CDY16716 | ProteinID:CDY16716.1 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0004EDDE29 |
| UniProt:A0A078FUQ6 | MapMan:35.2 | : | : | : | : |
Description
BnaA09g06660DBnaA09g06660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUQ6]
Coordinates
chrLK032067:-:2730..6252
Molecular Weight (calculated)
62127.0 Da
IEP (calculated)
4.756
GRAVY (calculated)
-1.549
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETLDEKT PGAGSPAKEE LGVGDASKVE EVADPPRNDD AEKKEEAESK EGELEDKGDV KDEEEEGEGS GSKKEAVTPS SDRPTRERKQ VERFSSSGPV
101: RVTPSKSVSI EKGRGTPLKE IPNVAHNLSK RKADDNLMLL HTILYGKKAK AQMVKKNIGQ FSGFAWSEKE EEKQRARLKE KLDKCIKEKL IFFCDVLDIP
201: VNRSNIKKEE LAVKVLEFLE SPKATRDVIL ADREKQAKKR KSTQRKGKSG ESSETPAKRK RQTKKRDQPE AEEGKDEGDS DSEGTKDANE DDDSAREEEE
301: SDHEKAGTED EKDEAEDEKP SDKKISSKKT EEKSSGTKGK DKQASAKRSK KSGEKTSKRV AKSTSSPAKK QKVDHEESSK GKSKKQSTKT QAKGTKEKGK
401: AIKKGKAEPT REEMLEVVSK MLQEVDFNTA TLSDILKKLS KHFGVDLSHR KPEVKAVITD AISAMTDEED EEEENSEAGS DGEKEEEKKA EAESDKEEEE
501: EKDEEEEKAE AESDKEKEEE EKAEAESDKE KEEEKDEEEK AEAESDKEKE EEKPKD
101: RVTPSKSVSI EKGRGTPLKE IPNVAHNLSK RKADDNLMLL HTILYGKKAK AQMVKKNIGQ FSGFAWSEKE EEKQRARLKE KLDKCIKEKL IFFCDVLDIP
201: VNRSNIKKEE LAVKVLEFLE SPKATRDVIL ADREKQAKKR KSTQRKGKSG ESSETPAKRK RQTKKRDQPE AEEGKDEGDS DSEGTKDANE DDDSAREEEE
301: SDHEKAGTED EKDEAEDEKP SDKKISSKKT EEKSSGTKGK DKQASAKRSK KSGEKTSKRV AKSTSSPAKK QKVDHEESSK GKSKKQSTKT QAKGTKEKGK
401: AIKKGKAEPT REEMLEVVSK MLQEVDFNTA TLSDILKKLS KHFGVDLSHR KPEVKAVITD AISAMTDEED EEEENSEAGS DGEKEEEKKA EAESDKEEEE
501: EKDEEEEKAE AESDKEKEEE EKAEAESDKE KEEEKDEEEK AEAESDKEKE EEKPKD
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.