Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038644.1-P | Field mustard | nucleus | 83.88 | 83.88 |
| CDY62886 | Canola | nucleus | 78.98 | 79.63 |
| CDY39861 | Canola | nucleus | 51.02 | 69.25 |
| AT5G63550.2 | Thale cress | nucleus | 66.73 | 61.58 |
| CDY16716 | Canola | nucleus | 66.53 | 58.63 |
| CDX81185 | Canola | nucleus | 66.73 | 58.39 |
| CDY69625 | Canola | nucleus | 32.65 | 54.79 |
| CDX77921 | Canola | nucleus | 43.47 | 50.0 |
| CDY37915 | Canola | nucleus | 42.86 | 49.65 |
| CDY05865 | Canola | plastid | 30.61 | 46.88 |
| KRH41110 | Soybean | nucleus | 38.78 | 39.01 |
| Solyc06g072660.2.1 | Tomato | nucleus | 39.18 | 36.57 |
| PGSC0003DMT400081181 | Potato | nucleus | 40.41 | 36.33 |
| KRH63796 | Soybean | nucleus | 39.59 | 36.26 |
| Solyc03g097490.2.1 | Tomato | nucleus | 39.39 | 35.87 |
| KRH59791 | Soybean | nucleus | 37.35 | 34.79 |
| KRH54152 | Soybean | nucleus | 38.78 | 34.61 |
| PGSC0003DMT400069255 | Potato | nucleus | 34.9 | 34.55 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 32.86 | 34.48 |
| EES01993 | Sorghum | nucleus | 35.1 | 33.92 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 39.39 | 33.86 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 33.06 | 32.93 |
| Os01t0924900-01 | Rice | nucleus | 34.08 | 32.81 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 32.65 | 32.52 |
| GSMUA_Achr11P... | Banana | nucleus | 34.9 | 31.38 |
| GSMUA_Achr10P... | Banana | nucleus | 33.06 | 29.14 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 33.27 | 28.65 |
| Zm00001d042302_P002 | Maize | nucleus | 32.24 | 27.38 |
| CDX94304 | Canola | nucleus | 21.22 | 23.8 |
| CDY06563 | Canola | nucleus | 29.39 | 20.96 |
| CDY20754 | Canola | nucleus | 29.59 | 18.26 |
| CDX89318 | Canola | nucleus | 26.12 | 18.18 |
| CDY28645 | Canola | nucleus | 28.78 | 17.78 |
| CDY17352 | Canola | extracellular, vacuole | 28.98 | 17.15 |
| CDX97358 | Canola | nucleus | 27.55 | 11.13 |
Protein Annotations
| EnsemblPlants:CDY41517 | EnsemblPlantsGene:GSBRNA2T00073138001 | Gene3D:1.10.10.60 | GO:A0A078HUN7 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PFAM:PF08766 | ProteinID:CDY41517 | ProteinID:CDY41517.1 | SEG:seg | SUPFAM:SSF109715 |
| UniParc:UPI0004EE8381 | UniProt:A0A078HUN7 | MapMan:35.2 | : | : | : |
Description
BnaA06g22700DBnaA06g22700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUN7]
Coordinates
chrLK032499:+:183571..186554
Molecular Weight (calculated)
55419.2 Da
IEP (calculated)
5.904
GRAVY (calculated)
-1.452
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETLEGKR PGVESSPAKE KEEAERKNED ELEDIKSEEE KVETQRSRER PTRERKKVEL FSLSTPLRPT PAKSFSIEKG RGTLLRDIPN VAHQLSKRKA
101: DDNLILLHTI LYGKKAKAQM VKKNIGQFSG FVWLEKEEEK QRTRVKEKLD KCIKEKLIFF CDVLDIPISR SSIKKEEVAA KVLDFLESPK ASRDVLLADR
201: EKQTKKRKST QKKRKSAASS DTPAKRKRQT KKKDHPSDTE EGKGEDDSDS EGTKDTHDED DAAPEEDSDH EKTEDEKDEA EDEKPSDKKN SSKKIKEDSS
301: AGTKGKDKQA SAKVSKKSGE KSSKRVANST SSPAKKQKVD HEESSKGKSK KQSVKPQANG SKNKGKGTKK GKVEPTREEM LEFVSKILKE VDFNTATLST
401: ILKKLSDHFG VDLSHRKPEV KEVIQDAINE MTDDEVEDED EKSEAGSDEE KEEEEKKAEA ESSKEKDEEE EKAEAESNKE KDEEEEKLKD
101: DDNLILLHTI LYGKKAKAQM VKKNIGQFSG FVWLEKEEEK QRTRVKEKLD KCIKEKLIFF CDVLDIPISR SSIKKEEVAA KVLDFLESPK ASRDVLLADR
201: EKQTKKRKST QKKRKSAASS DTPAKRKRQT KKKDHPSDTE EGKGEDDSDS EGTKDTHDED DAAPEEDSDH EKTEDEKDEA EDEKPSDKKN SSKKIKEDSS
301: AGTKGKDKQA SAKVSKKSGE KSSKRVANST SSPAKKQKVD HEESSKGKSK KQSVKPQANG SKNKGKGTKK GKVEPTREEM LEFVSKILKE VDFNTATLST
401: ILKKLSDHFG VDLSHRKPEV KEVIQDAINE MTDDEVEDED EKSEAGSDEE KEEEEKKAEA ESSKEKDEEE EKAEAESNKE KDEEEEKLKD
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.