Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41517 | Canola | nucleus | 79.63 | 78.98 |
| CDY39861 | Canola | nucleus | 49.18 | 66.2 |
| CDX81185 | Canola | nucleus | 70.78 | 61.43 |
| AT5G63550.2 | Thale cress | nucleus | 66.67 | 61.02 |
| CDY16716 | Canola | nucleus | 67.49 | 58.99 |
| CDY69625 | Canola | nucleus | 33.74 | 56.16 |
| CDY37915 | Canola | nucleus | 44.65 | 51.3 |
| CDX77921 | Canola | nucleus | 44.03 | 50.23 |
| CDY05865 | Canola | plastid | 30.86 | 46.88 |
| KRH41110 | Soybean | nucleus | 40.33 | 40.25 |
| Solyc06g072660.2.1 | Tomato | nucleus | 40.33 | 37.33 |
| KRH63796 | Soybean | nucleus | 40.33 | 36.64 |
| PGSC0003DMT400081181 | Potato | nucleus | 40.53 | 36.15 |
| PGSC0003DMT400069255 | Potato | nucleus | 36.63 | 35.96 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 34.36 | 35.76 |
| KRH59791 | Soybean | nucleus | 38.48 | 35.55 |
| Solyc03g097490.2.1 | Tomato | nucleus | 39.3 | 35.5 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 41.36 | 35.26 |
| KRH54152 | Soybean | nucleus | 39.09 | 34.61 |
| GSMUA_Achr11P... | Banana | nucleus | 37.86 | 33.76 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 34.16 | 33.74 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 33.95 | 33.54 |
| EES01993 | Sorghum | nucleus | 33.74 | 32.35 |
| Os01t0924900-01 | Rice | nucleus | 32.72 | 31.24 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 34.77 | 29.7 |
| GSMUA_Achr10P... | Banana | nucleus | 33.95 | 29.68 |
| Zm00001d042302_P002 | Maize | nucleus | 32.1 | 27.04 |
| CDX94304 | Canola | nucleus | 23.05 | 25.63 |
| CDY06563 | Canola | nucleus | 29.84 | 21.11 |
| CDX89318 | Canola | nucleus | 27.98 | 19.32 |
| CDY20754 | Canola | nucleus | 30.86 | 18.89 |
| CDY28645 | Canola | nucleus | 30.45 | 18.66 |
| CDY17352 | Canola | extracellular, vacuole | 29.84 | 17.51 |
| CDX97358 | Canola | nucleus | 29.42 | 11.79 |
Protein Annotations
| EnsemblPlants:CDY62886 | EnsemblPlantsGene:GSBRNA2T00037721001 | Gene3D:1.10.10.60 | GO:A0A078J7W7 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PFAM:PF08766 | ProteinID:CDY62886 | ProteinID:CDY62886.1 | SEG:seg | SUPFAM:SSF109715 |
| UniParc:UPI0004EF29C5 | UniProt:A0A078J7W7 | MapMan:35.2 | : | : | : |
Description
BnaC03g74680DBnaC03g74680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7W7]
Coordinates
chrLK034213:-:10368..13339
Molecular Weight (calculated)
54661.3 Da
IEP (calculated)
6.164
GRAVY (calculated)
-1.392
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MATETLEGKR PGVESSPAKE KEEANSHSNE EAERKNEDEL EDIKSEEEKV ETQRSRERPT RERKKVELFS LSTPLRPTPA KSLSIEKGRG TLLRDIPNVA
101: HQLSKRKADD NLILLHTILY GKKAKAQMVK KNIGQFSGFV WSEKEEEKQR ARVKEKLDKC IKDKLIFFCD VLDIPISRSS IKKEEVAAKV LDFLESPKAS
201: RDVLLADREK QAKKRKSTQK KRKSAASSDT PPAKRKRQTK KRDHPSDTEE GKGEGDSDSE GTKDTHDEDD AAPEEDSDHE KTETEDEEDE AEGEKPSDKK
301: ISSKKIKEES SAGTKGKDKQ ASAKVSKKSG EKSSKRVANS TSSPAKKQKV DHEESSKGKS KKKSVKPQAN GSKDKGKGTK KGKVEPTREE MLEFVSKILK
401: EVDFNTATLS TILKKLSDHF GVDLSHRKPE VKEVIQDAIN EMTDDEVEDE DEKSVAGSDE EKEEEEKNDE AESSKEKDEE EEKLKD
101: HQLSKRKADD NLILLHTILY GKKAKAQMVK KNIGQFSGFV WSEKEEEKQR ARVKEKLDKC IKDKLIFFCD VLDIPISRSS IKKEEVAAKV LDFLESPKAS
201: RDVLLADREK QAKKRKSTQK KRKSAASSDT PPAKRKRQTK KRDHPSDTEE GKGEGDSDSE GTKDTHDEDD AAPEEDSDHE KTETEDEEDE AEGEKPSDKK
301: ISSKKIKEES SAGTKGKDKQ ASAKVSKKSG EKSSKRVANS TSSPAKKQKV DHEESSKGKS KKKSVKPQAN GSKDKGKGTK KGKVEPTREE MLEFVSKILK
401: EVDFNTATLS TILKKLSDHF GVDLSHRKPE VKEVIQDAIN EMTDDEVEDE DEKSVAGSDE EKEEEEKNDE AESSKEKDEE EEKLKD
001: MATETLDEKT PEVNSPAKEE IDVVPKEEKE VEKEKVDSPR IGEAEEEKKE DEEEGEAKEG ELGEKDKEDD VESEEEEEEE EGSGSKKSSE KETVTPTSER
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
101: PTRERKKVER FSLSTPMRAP PSKSVSIEKG RGTPLREIPN VAHKLSKRKA DDNLMLLHTI LFGKKAKAQM VKRNIGQFSG FAWSEKEEEK QRARIKEKID
201: KCVKEKLIVF CDVLDIPISR SNVKKEELAV KVLEFLESPK ETRDVIIADQ EKQAKKRKST PKRGKSGESS DTPAKRKRQT KKRDLPSDTE EGKDEGDADS
301: EGTNDPHEED DAAPEEESDH EKTDTDDEKD EVEVEKPSKK KSSSKKTVEE SSGSKGKDKQ PSAKGSARSG EKSSKQIAKS TSSPAKKQKV DHVESSKEKS
401: KKQPSKPQAK GSKEKGKATK KGKAKAEPTR KEMLEVVSKI LKEVDFNTAT LSDILQKLSD HFGVELSHRK PEVKDVITEA INAMTDDEEE DEEEEAEAGS
501: DKEKEEVKGE EEEEKAEAES DKEKEKEEPK D
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9FFQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.