Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 47.16 | 46.22 |
| TraesCS3A01G436900.1 | Wheat | nucleus | 35.23 | 41.11 |
| Os01t0924900-01 | Rice | nucleus | 38.35 | 41.06 |
| TraesCS3D01G429200.1 | Wheat | nucleus | 37.06 | 41.06 |
| Bra029213.1-P | Field mustard | nucleus | 20.73 | 40.07 |
| AT3G48710.1 | Thale cress | nucleus | 33.76 | 39.83 |
| TraesCS3B01G471100.1 | Wheat | nucleus | 35.6 | 39.43 |
| EES01993 | Sorghum | nucleus | 36.33 | 39.05 |
| CDY69625 | Canola | nucleus | 20.92 | 39.04 |
| KRH41110 | Soybean | nucleus | 34.86 | 39.01 |
| CDY37915 | Canola | nucleus | 29.91 | 38.53 |
| KRH63796 | Soybean | nucleus | 37.8 | 38.5 |
| VIT_17s0000g00960.t01 | Wine grape | nucleus | 40.0 | 38.25 |
| CDY62886 | Canola | nucleus | 33.76 | 37.86 |
| Bra019559.1-P | Field mustard | nucleus | 28.99 | 37.8 |
| CDX77921 | Canola | nucleus | 29.54 | 37.79 |
| KRH59791 | Soybean | nucleus | 35.96 | 37.26 |
| KRH54152 | Soybean | nucleus | 37.43 | 37.16 |
| PGSC0003DMT400081181 | Potato | nucleus | 37.06 | 37.06 |
| Solyc03g097490.2.1 | Tomato | nucleus | 36.33 | 36.8 |
| CDY05865 | Canola | plastid | 21.28 | 36.25 |
| Bra038644.1-P | Field mustard | nucleus | 31.38 | 34.9 |
| CDY41517 | Canola | nucleus | 31.38 | 34.9 |
| Zm00001d042302_P002 | Maize | nucleus | 36.88 | 34.84 |
| HORVU3Hr1G095450.1 | Barley | plasma membrane | 35.6 | 34.09 |
| CDY39861 | Canola | nucleus | 22.57 | 34.07 |
| Solyc06g072660.2.1 | Tomato | nucleus | 32.11 | 33.33 |
| AT5G63550.2 | Thale cress | nucleus | 32.11 | 32.96 |
| CDX81185 | Canola | nucleus | 32.48 | 31.61 |
| Bra035837.1-P | Field mustard | nucleus | 31.01 | 30.78 |
| CDY16716 | Canola | nucleus | 31.19 | 30.58 |
| GSMUA_Achr6P35030_001 | Banana | nucleus | 28.81 | 29.68 |
| PGSC0003DMT400069255 | Potato | nucleus | 26.79 | 29.49 |
| GSMUA_Achr9P09240_001 | Banana | nucleus | 15.96 | 28.71 |
| GSMUA_Achr4P23560_001 | Banana | nucleus | 26.97 | 27.43 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 12.66 | 21.5 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P08490_001 | EnsemblPlants:GSMUA_Achr11T08490_001 | EnsemblPlantsGene:GSMUA_Achr11G08490_001 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI000295D0AF | UniProt:M0RQH9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative DEK C terminal domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08490_001]
Coordinates
chr11:-:6585302..6590554
Molecular Weight (calculated)
60816.0 Da
IEP (calculated)
5.851
GRAVY (calculated)
-1.373
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTEAGEDAK NAGDGSPTAE QEDKEQGDGS SAAPHEAGGE ESKEEEGGDV AKEKVEGEKR KRGRKRKAAL DKSGEEGEGM PKERKRRSVV VREGATPVER
101: PSRERKTVER FSEMSLPRSP VPKTLSFKQG SGEKLKDIPN VFFKLSKRKA DDNLQALHGI LFGRKANVHY LKRNILQFSG FVWSENEAKQ RARFKEKLDK
201: CKKERLLDFC DLLDIHAVKA SSKKEEIIAN LMEFLESPCV TRDVVLAEKE EKKRGRAKGR SHSTPGEASS DRRIKKQRKS HKQSAQDENE DNEEGASVDT
301: KEASSDGEGD GHALEESDRD LDHEENEEDE QEEPEATNKS EDEPNSTHGN KKGSSKEMNK QDSRASTEEK SAMRKNSAKV TKSALSSPRK SDPVDDSDSE
401: PRSTTKSKQE RGRKGRAIEK PPATKENTRK KRSAKSESKV TEKKRGKVKT SKVTNSEPST EELHAVVSDI LKEVDFNTAT LADILRQLGA RFKMNLMDRK
501: AEVKRIIEDV INSMSDDEDG EDEDRAEDAK EDDTKEGSDD GDGDK
101: PSRERKTVER FSEMSLPRSP VPKTLSFKQG SGEKLKDIPN VFFKLSKRKA DDNLQALHGI LFGRKANVHY LKRNILQFSG FVWSENEAKQ RARFKEKLDK
201: CKKERLLDFC DLLDIHAVKA SSKKEEIIAN LMEFLESPCV TRDVVLAEKE EKKRGRAKGR SHSTPGEASS DRRIKKQRKS HKQSAQDENE DNEEGASVDT
301: KEASSDGEGD GHALEESDRD LDHEENEEDE QEEPEATNKS EDEPNSTHGN KKGSSKEMNK QDSRASTEEK SAMRKNSAKV TKSALSSPRK SDPVDDSDSE
401: PRSTTKSKQE RGRKGRAIEK PPATKENTRK KRSAKSESKV TEKKRGKVKT SKVTNSEPST EELHAVVSDI LKEVDFNTAT LADILRQLGA RFKMNLMDRK
501: AEVKRIIEDV INSMSDDEDG EDEDRAEDAK EDDTKEGSDD GDGDK
001: MATETLELKT PQLADTVAVT EKDTETKKKD EVEKDEAMEE KGEEIDGEKV KSPVTPVSER PIRERKRTGR YVIDTPPRSS GNKPLSITQG RGTRLKEIPN
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
101: VAYKLSKRKP DDNLFLLHTI LYGKKAKAQM LKKNIGQFSG FVWSEQEEEK QRAKAKEKLD KCIKEKLIDF CDVLDIPVNK STVKKEELAV RVLEFLVCPK
201: ATRDILLADS EKETKKRKKS TSKNVTSGES SHVPAKRRRQ AKKQEQPTET EGNGESDVGS EGTNDSNGED DVAPEEENNK SEDTETEDEK DKAKEKTKST
301: DKKRLSKRTK KEKPAAEEEK SIKGSAKSSR KSFRQVDKST TSSSKKQKVD KDDSSKEKGK TQTSKPQAKG SKDQGQSRKK GKKEPTRKEL HVVVTKILKE
401: VDFNTATLSD ILRKLGSHFG IDLMHRKAEV KDIITDAINE MSDDDDEKEE DTEDEGEKEG KD
Arabidopsis Description
At3g48710 [Source:UniProtKB/TrEMBL;Acc:Q9SMM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.