Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09240_001 | Banana | nucleus | 29.68 | 51.82 |
| GSMUA_Achr4P23560_001 | Banana | nucleus | 47.45 | 46.83 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 21.17 | 34.89 |
| Zm00001d013757_P010 | Maize | nucleus | 38.56 | 31.24 |
| EER91265 | Sorghum | nucleus | 38.0 | 31.16 |
| Os03t0596900-01 | Rice | nucleus | 38.94 | 29.3 |
| GSMUA_Achr11P... | Banana | nucleus | 29.68 | 28.81 |
| Zm00001d033159_P001 | Maize | nucleus | 24.01 | 28.41 |
| GSMUA_Achr10P... | Banana | nucleus | 28.54 | 27.16 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 37.43 | 20.25 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 36.67 | 19.96 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 36.67 | 19.58 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 36.48 | 19.26 |
| OQU91413 | Sorghum | nucleus | 31.95 | 12.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P35030_001 | EnsemblPlants:GSMUA_Achr6T35030_001 | EnsemblPlantsGene:GSMUA_Achr6G35030_001 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0002948B1A |
| UniProt:M0TCU6 | MapMan:35.2 | : | : | : | : |
Description
Putative DEK C terminal domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G35030_001]
Coordinates
chr6:-:33385891..33397688
Molecular Weight (calculated)
59400.0 Da
IEP (calculated)
6.554
GRAVY (calculated)
-1.359
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNGSGPPTE DKSVVPNSGE HGNEEEKVGK EGEEGEGEEG SKEEENNMEE GDIQSTEKKI DEDKEEEKLN KKRSRGQKAD KKGEGKEGVT KARNSLSSPV
101: TSSIERPVRE RKTVERLVEV IEKEPSREFQ VEKGRGTPLK DIPNVAYKLA RKKPADIKLI HQTLFGRRGK AVNFKSHILQ FSGFVWHESD EKQRAKMKEK
201: LDKYVKDTLL DLCDLFDLPV SKANTRKEDL VAKLLDFLVA PHPIDEDVLS DDKQSMKSRK RKRVAKGSGS KSTEDTHSKQ SRKKRTRREG TPSAEETDSE
301: DDDVDDIKNG PYTGKIGKHS ENECKVSESE EASDEDERDE EDSGEDKQDK KKTPKQGSVG KEKKVGSSSR KVPTPATTKS PTKSSSSKHS KAENDDIGAK
401: VFSRKRRTVS SPQRKSTPRS EKKEKDTGKK VAKGKAKSEA EHPSKEELRK KICEILKEVD FNTATFTDIL KQLAGHYKLD LTPRKASIKL LIQEELTKLA
501: EAEEDEDDED EEDAEKEENP EPTGKKVEA
101: TSSIERPVRE RKTVERLVEV IEKEPSREFQ VEKGRGTPLK DIPNVAYKLA RKKPADIKLI HQTLFGRRGK AVNFKSHILQ FSGFVWHESD EKQRAKMKEK
201: LDKYVKDTLL DLCDLFDLPV SKANTRKEDL VAKLLDFLVA PHPIDEDVLS DDKQSMKSRK RKRVAKGSGS KSTEDTHSKQ SRKKRTRREG TPSAEETDSE
301: DDDVDDIKNG PYTGKIGKHS ENECKVSESE EASDEDERDE EDSGEDKQDK KKTPKQGSVG KEKKVGSSSR KVPTPATTKS PTKSSSSKHS KAENDDIGAK
401: VFSRKRRTVS SPQRKSTPRS EKKEKDTGKK VAKGKAKSEA EHPSKEELRK KICEILKEVD FNTATFTDIL KQLAGHYKLD LTPRKASIKL LIQEELTKLA
501: EAEEDEDDED EEDAEKEENP EPTGKKVEA
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.